RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	LYG2	Q86SG7	212 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	C12orf29	Q8N999	325 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR6K3	Q8NGY3	331 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	MFSD8	Q8NHS3	518 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	ZBTB9	Q96C00	473 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	ANKRD36BP1	Q96IX9	119 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	KCNS1	Q96KK3	526 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	SPACA5	Q96QH8	159 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	ATOH8	Q96SQ7	321 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	TIMM17A	Q99595	171 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	PARVA	Q9NVD7	372 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	TAS2R5	Q9NYW4	299 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	DKKL1	Q9UK85	242 aa		4.95	□□□□□ -1.62
LRCH3-215	ENST00000476664	IGKV2D-30	A0A075B6S6	120 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	TRAV17	A0A0B4J275	112 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	LOC105371267	A0A1B0GV96	52 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664		A0A1W2PPR1	153 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664		H7C423	109 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	CCDC22	O60826	627 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	MMP23A	O75900	390 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	ARL6IP5	O75915	188 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	ZNF432	O94892	652 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	IGLV3-27	P01718	113 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	HSPB1	P04792	205 aa	Known RBP	4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	CST2	P09228	141 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	CECR9	P0C854	216 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	OMG	P23515	440 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	PRTN3	P24158	256 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	MIP	P30301	263 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	MEOX2	P50222	304 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	RAB25	P57735	213 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	SPCS3	P61009	180 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	NAA20	P61599	178 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	PNOC	Q13519	176 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	C1D	Q13901	141 aa	Known RBP	4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664		Q1RN00	199 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	TRIQK	Q629K1	86 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	ZNF525	Q8N782	197 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	SLC35G3	Q8N808	338 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	KLHL30-AS1	Q8NEE0	82 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR10G4	Q8NGN3	311 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR10D3	Q8NH80	312 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR2V1	Q8NHB1	315 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	ABHD3	Q8WU67	409 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	DCUN1D4	Q92564	292 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	TMBIM1	Q969X1	311 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	TAMM41	Q96BW9	452 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	TMEM101	Q96IK0	257 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	BTF3L4	Q96K17	158 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	EBPL	Q9BY08	206 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	SAMD10	Q9BYL1	202 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	UBQLN4	Q9NRR5	601 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	C19orf12	Q9NSK7	152 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	NUFIP1	Q9UHK0	495 aa	Known RBP	4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	GLS2	Q9UI32	602 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	HS3ST2	Q9Y278	367 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	INSIG2	Q9Y5U4	225 aa		4.94	□□□□□ -1.62
LRCH3-215	ENST00000476664	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	IGKV1-27	A0A075B6S5	117 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	LOC389332	A0A1B0GUA5	103 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664		H3BP45	60 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664		M0R1X1	148 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	UPK1A	O00322	258 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	HAND1	O96004	215 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	CA2	P00918	260 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	CD5	P06127	495 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	CFC1B	P0CG36	223 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	CFC1	P0CG37	223 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	CRISP2	P16562	243 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	M6PR	P20645	277 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	POLR2I	P36954	125 aa	Known RBP	4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	H2BFS	P57053	126 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	RAB5B	P61020	215 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	KIAA0040	Q15053	153 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	ZNF404	Q494X3	552 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	TCTEX1D4	Q5JR98	221 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR51D1	Q8NGF3	324 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR11L1	Q8NGX0	322 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR1P1	Q8NH06	330 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664		Q8WTZ3	238 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	DYDC1	Q8WWB3	177 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	NEURL3	Q96EH8	262 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	OR4K3	Q96R72	315 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	PSG11	Q9UQ72	335 aa		4.93	□□□□□ -1.62
LRCH3-215	ENST00000476664	DSCAM	O60469	2012 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	CAD	P27708	2225 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	TRAV8-3	A0A0A6YYJ7	113 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	CD300LB	A8K4G0	201 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	PLIN3	O60664	434 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	SUPT3H	O75486	399 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	KLF7	O75840	302 aa	Predicted RBP	4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	SUPT7L	O94864	414 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	EPPIN	O95925	133 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	IFNA14	P01570	189 aa		4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	SNRPA	P09012	282 aa	Known RBP	4.92	□□□□□ -1.62
LRCH3-215	ENST00000476664	NELFE	P18615	380 aa	Known RBP	4.92	□□□□□ -1.62

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