RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SSBP2P81877 361 aaPredicted RBP7.89□□□□□ -1.15
SF3A3-204ENST00000462258 DGCR2P98153 550 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 FXYD3Q14802 87 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 TMEM177Q53S58 311 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 CNIH2Q6PI25 160 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 KCTD9Q7L273 389 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 OR1N2Q8NGR9 330 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 DDB2Q92466 427 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 ALX4Q9H161 411 aaPredicted RBP7.89□□□□□ -1.15
SF3A3-204ENST00000462258 SLA2Q9H6Q3 261 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 ZMAT5Q9UDW3 170 aaKnown RBP7.89□□□□□ -1.15
SF3A3-204ENST00000462258 ANXA10Q9UJ72 324 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 OR2W1Q9Y3N9 320 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 NUBP2Q9Y5Y2 271 aa7.89□□□□□ -1.15
SF3A3-204ENST00000462258 IGHV4OR15-8A0A075B7B6 117 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 A0A087WW49 117 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 A0A0A6YYH2 397 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 A6NJ64 397 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 LINC00473A8K010 186 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 J3QRK9 145 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 RAMP3O60896 148 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 CNIH1O95406 144 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 CRYZL1O95825 349 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 CRYGBP07316 175 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 CD40LGP29965 261 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 TGFBR1P36897 503 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 ARPC4P59998 168 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 PJVKQ0ZLH3 352 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 DCTN2Q13561 401 aaKnown RBP7.88□□□□□ -1.15
SF3A3-204ENST00000462258 VMA21Q3ZAQ7 101 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 POC5Q8NA72 575 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 TSPAN14Q8NG11 270 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 MS4A10Q96PG2 267 aa7.88□□□□□ -1.15
SF3A3-204ENST00000462258 TRAV18A0A075B6X5 111 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 A0A087WXM4 84 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 IGKV1D-13A0A0B4J2D9 117 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 SRRM4A7MD48 611 aaKnown RBP7.87□□□□□ -1.15
SF3A3-204ENST00000462258 LINC01619G3V211 115 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 H3BUA1 57 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 AIREO43918 545 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 TMEM127O75204 238 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 TUSC2O75896 110 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 SLC22A5O76082 557 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 IGHV3-11P01762 117 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 HLA-DQB1P01920 261 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 TRGV3P03979 118 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 SAA1P0DJI8 122 aaPredicted RBP7.87□□□□□ -1.15
SF3A3-204ENST00000462258 IGKV1-13P0DP09 117 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 SLURP1P55000 103 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 UBE2KP61086 200 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 DEFB121Q5J5C9 76 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 OR2B11Q5JQS5 317 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 DMRTA1Q5VZB9 504 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 IDO2Q6ZQW0 420 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 OVCH2Q7RTZ1 564 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 BEST4Q8NFU0 473 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 OSR1Q8TAX0 266 aaPredicted RBP7.87□□□□□ -1.15
SF3A3-204ENST00000462258 PHB2Q99623 299 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 ZNF355PQ9NSJ1 428 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 SPATA2Q9UM82 520 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 MRPS7Q9Y2R9 242 aaKnown RBP7.87□□□□□ -1.15
SF3A3-204ENST00000462258 RBMX2Q9Y388 322 aaKnown RBP7.87□□□□□ -1.15
SF3A3-204ENST00000462258 COL7A1Q02388 2944 aa7.87□□□□□ -1.15
SF3A3-204ENST00000462258 OVOL1O14753 267 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 CREBL2O60519 120 aaPredicted RBP7.86□□□□□ -1.15
SF3A3-204ENST00000462258 FCGR3BO75015 233 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 IGLV2-14P01704 120 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 ECI1P42126 302 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 LSM3P62310 102 aaKnown RBP7.86□□□□□ -1.15
SF3A3-204ENST00000462258 TNXAQ16473 311 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 UBE2NLQ5JXB2 153 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 CROCCP3Q8IVE0 287 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 GVQW1Q8N7I0 195 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 TEX45Q8NA69 505 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 ACOT12Q8WYK0 555 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 DCUN1D4Q92564 292 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 YIPF6Q96EC8 236 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 PRR25Q96S07 402 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 KRTAP3-2Q9BYR7 98 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 AUNIPQ9H7T9 357 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 DIABLOQ9NR28 239 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 SCOCQ9UIL1 159 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 PRELID3BQ9Y3B1 194 aa7.86□□□□□ -1.15
SF3A3-204ENST00000462258 TNCP24821 2201 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 SAP30O75446 220 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 APELAP0DMC3 54 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 PTHLHP12272 177 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 AADACP22760 399 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 INSL3P51460 131 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 RPL30P62888 115 aaKnown RBP7.85□□□□□ -1.15
SF3A3-204ENST00000462258 DEFA5Q01523 94 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 CD69Q07108 199 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 CDK10Q15131 360 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 PRSS8Q16651 343 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 MRGPRG-AS1Q2M3A8 158 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 HOGA1Q86XE5 327 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 OR5T1Q8NG75 326 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 OR13F1Q8NGS4 319 aa7.85□□□□□ -1.15
SF3A3-204ENST00000462258 OR4S2Q8NH73 311 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms