RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ZNF43P17038 809 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 S100GP29377 79 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 GRPRP30550 384 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 GABRA3P34903 492 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 SPINT3P49223 89 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF133P52736 654 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 EFNB2P52799 333 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 BIDP55957 195 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 RAB38P57729 211 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 RND3P61587 244 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 RPS24P62847 133 aaKnown RBP3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 CSNK1G2P78368 415 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 PAX8Q06710 450 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 SCGB2A2Q13296 93 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 ARFRP1Q13795 201 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 NSDHLQ15738 373 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 VAMP3Q15836 100 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 PMCHL1Q16048 86 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 OCIAD2Q56VL3 154 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 GLYATL3Q5SZD4 288 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 DCST2Q5T1A1 773 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 MRPL2Q5T653 305 aaKnown RBP3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 Q6ZN92 141 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 COX15Q7KZN9 410 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 CDC20BQ86Y33 519 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 LGI3Q8N145 548 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 CDRT4Q8N9R6 151 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 APCDD1LQ8NCL9 501 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR5AU1Q8NGC0 362 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR2T10Q8NGZ9 312 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR4F5Q8NH21 305 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 CLDND2Q8NHS1 167 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 SPATA3Q8NHX4 192 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 TMEM37Q8WXS4 190 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 TMEM234Q8WY98 164 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 FAM3CQ92520 227 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 KLK6Q92876 244 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 TOMM40LQ969M1 308 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 SLC25A44Q96H78 314 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 VGLL1Q99990 258 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 SMIM7Q9BQ49 75 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 PYGO2Q9BRQ0 406 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 LIME1Q9H400 295 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF430Q9H8G1 570 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 JPT2Q9H910 190 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 TMEM106BQ9NUM4 274 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 EHFQ9NZC4 300 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 LSM7Q9UK45 103 aaKnown RBP3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 RARRES3Q9UL19 164 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 CLEC4EQ9ULY5 219 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 ANAPC10Q9UM13 185 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 LAMTOR2Q9Y2Q5 125 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 MOB4Q9Y3A3 225 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR51B4Q9Y5P0 310 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 COL4A6Q14031 1691 aa3.54□□□□□ -1.84
HMGB1P16-201ENST00000447155 HEATR5BQ9P2D3 2071 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 IGHV2OR16-5A0A0B4J2B6 119 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 A0A1B0GV50 99 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 OR6C6A6NF89 314 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF878C9JN71 531 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 C17orf112F2Z3M2 114 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 TRAPPC2LH3BP13 241 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 J3QR89 54 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 RRP8O43159 456 aaKnown RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 TBL1XO60907 577 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 UPK3AO75631 287 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 KBTBD11O94819 623 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 KLF8O95600 359 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SEMA4FO95754 770 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 TGFAP01135 160 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 MT-ND6P03923 174 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 CTXN2P0C2S0 81 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 PNMTP11086 282 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 CTSEP14091 401 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 IL9P15248 144 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 HIST1H1DP16402 221 aaKnown RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 CSRP1P21291 193 aaKnown RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 ACAA2P42765 397 aaKnown RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SLC6A8P48029 635 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 EMP2P54851 167 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 RPS4XP62701 263 aaKnown RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 MRPS6P82932 125 aaKnown RBP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 EWSR1Q01844 656 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF92Q03936 586 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 HIST3H3Q16695 136 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 MPV17LQ2QL34 196 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 BSXQ3C1V8 233 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SPATA45Q537H7 98 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SPIN3Q5JUX0 258 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 C1orf100Q5SVJ3 147 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 LDLRAD2Q5SZI1 272 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 ZNF684Q5T5D7 378 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 C1orf185Q5T7R7 199 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SAMD13Q5VXD3 122 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 SLC48A1Q6P1K1 146 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 C22orf39Q6P5X5 142 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 FAM159AQ6UWV7 190 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 GTF2H5Q6ZYL4 71 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 TCF24Q7RTU0 167 aa3.53□□□□□ -1.84
HMGB1P16-201ENST00000447155 NIT1Q86X76 327 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms