RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 OR2S2Q9NQN1 319 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 TUBG2Q9NRH3 451 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 CCL28Q9NRJ3 127 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 SLC2A9Q9NRM0 540 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM100Q9NV29 134 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 ASF1BQ9NVP2 202 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 CLCF1Q9UBD9 225 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 NSG2Q9Y328 171 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM56-RWDD3S4R434 201 aa2.82□□□□□ -1.96
HMGB3P11-201ENST00000440127 KNL1Q8NG31 2342 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGLV5-45A0A087WSX0 123 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 BORCS7-ASMTA0A0B4J1R7 106 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 PIGBOS1A0A0B4J2F0 54 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 DUXBA0A1W2PPF3 345 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 A0A1W2PR80 420 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM218A2RU14 115 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 NKX2-6A6NCS4 301 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM210A6NLX4 147 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF705EA8MWA4 302 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 J3QT63 122 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SIRPB1O00241 398 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 CDIPTO14735 213 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 HSD17B6O14756 317 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SH2D1BO14796 132 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 RHBDL1O75783 438 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 CEACAM4O75871 244 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 LYZL6O75951 148 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 CDS2O95674 445 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGHV4-39P01824 125 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF44P15621 663 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 PVALBP20472 110 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 S100GP29377 79 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 GNRHRP30968 328 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 KCNJ3P48549 501 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SULT1A2P50226 295 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 IDH3GP51553 393 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM33P57088 247 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 HLA-DRB3P79483 266 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 RPL24P83731 157 aaKnown RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 DEFA5Q01523 94 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 PJVKQ0ZLH3 352 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SRSF6Q13247 344 aaKnown RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 BTN1A1Q13410 526 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 GNMTQ14749 295 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR8G1Q15617 311 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 TSC22D1Q15714 1073 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 DEFB109BQ30KR1 87 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SPATA46Q5T0L3 261 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 RPL7L1Q6DKI1 246 aaKnown RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 Q6P435 159 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF880Q6PDB4 577 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 FIP1L1Q6UN15 594 aaKnown RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 IL34Q6ZMJ4 242 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF818PQ6ZRF7 136 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 Q6ZT83 130 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 MOB1BQ7L9L4 216 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 C5orf24Q7Z6I8 188 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF695Q8IW36 515 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 CMTM1Q8IZ96 169 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 H1FOOQ8IZA3 346 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SELENOHQ8IZQ5 122 aaKnown RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 GCNT2Q8N0V5 402 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 GAPTQ8N292 157 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZADH2Q8N4Q0 377 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 KLHDC1Q8N7A1 406 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SLC35G3Q8N808 338 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 CNEP1R1Q8N9A8 125 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 UBAC2Q8NBM4 344 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR8G5Q8NG78 346 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR52M1Q8NGK5 317 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR4D5Q8NGN0 318 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR4A4PQ8NGN8 299 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR1J1Q8NGS3 322 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR4A16Q8NH70 328 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR10J5Q8NHC4 309 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 LHFPL5Q8TAF8 219 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SLC25A40Q8TBP6 338 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 MRPL30Q8TCC3 161 aaKnown RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 RDH5Q92781 318 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 IL22RA2Q969J5 263 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 NARS2Q96I59 477 aaKnown RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 ABHD14BQ96IU4 210 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 AKR1E2Q96JD6 320 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SMIM8Q96KF7 97 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF488Q96MN9 340 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 TP53RKQ96S44 253 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SPIN2AQ99865 258 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SPAG8Q99932 426 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SPIN2BQ9BPZ2 258 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 ALKBH7Q9BT30 221 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SMIM3Q9BZL3 60 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR2J1Q9GZK6 312 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 SIRPDQ9H106 197 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 MMP26Q9NRE1 261 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 TREM2Q9NZC2 230 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 RCL1Q9Y2P8 373 aaKnown RBP2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 POLDIP2Q9Y2S7 368 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 CACNA1EQ15878 2313 aa2.81□□□□□ -1.96
HMGB3P11-201ENST00000440127 RALGAPA1Q6GYQ0 2036 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 PHF3Q92576 2039 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms