RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 FAM122AQ96E09 287 aa8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 CDH20Q9HBT6 801 aa8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 IFNA5P01569 189 aa8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 CD55P08174 381 aa8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 RPS16P62249 146 aaKnown RBP8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 Q5PR19 223 aa8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 COL5A1-AS1Q5SY13 56 aa8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 OR52L2PQ8NGH6 319 aa8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 KLF14Q8TD94 323 aaPredicted RBP8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 PARD6GQ9BYG4 376 aaPredicted RBP8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 SMDT1Q9H4I9 107 aa8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 METRNQ9UJH8 293 aa8.74□□□□□ -1.01
CLSTN1-203ENST00000435891 INTS1Q8N201 2190 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 C12orf77C9JDV5 145 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 M0R296 226 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 HAND1O96004 215 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 HSPB1P04792 205 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 SOX8P57073 446 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 BRWD1-AS2P59051 145 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 UBE2NP61088 152 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 C11orf53Q8IXP5 236 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 OR4C12Q96R67 309 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 POLDIP2Q9Y2S7 368 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 WIPI2Q9Y4P8 454 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 NKX2-8O15522 239 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 KRASP01116 189 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 MDH2P40926 338 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 ZNF816Q0VGE8 651 aaPredicted RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 GAGE1Q13065 139 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 PATZ1Q9HBE1 687 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 OBP2BQ9NPH6 170 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 TMEM9BQ9NQ34 198 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 RP1L1Q8IWN7 2480 aaPredicted RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 LOC102723971A0A1B0GUV8 181 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 ZNF320A2RRD8 509 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 SH2D1BO14796 132 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 CRYABP02511 175 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 G6PCP35575 357 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 GABRA6Q16445 453 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 PRAMEF6Q5VXH4 476 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 VWA1Q6PCB0 445 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 CNEP1R1Q8N9A8 125 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 RCC1LQ96I51 464 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 GMPPAQ96IJ6 420 aaPredicted RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 TRIB1Q96RU8 372 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 OR2D2Q9H210 308 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 GAL3ST2Q9H3Q3 398 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 LIN7CQ9NUP9 197 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 NAGKQ9UJ70 344 aa8.73□□□□□ -1.01
CLSTN1-203ENST00000435891 ICE1Q9Y2F5 2266 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 IGKV1D-33P01593 117 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 IGKV1-33P01594 117 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 WNT2P09544 360 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 FAM90A2PQ658T7 463 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 OR8G2PQ6IF36 304 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 MOB1BQ7L9L4 216 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 TXN2Q99757 166 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 MSL2Q9HCI7 577 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 CLCF1Q9UBD9 225 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 HEATR1Q9H583 2144 aaKnown RBP8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 DCHS1Q96JQ0 3298 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 IQCF6A8MYZ5 107 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 RAC2P15153 192 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 MAS1LP35410 378 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 SNIP1Q8TAD8 396 aaKnown RBP8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 RBMXL1Q96E39 390 aaKnown RBP8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 COQ2Q96H96 371 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 IGHV3-43A0A0B4J1X8 118 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 UBE2L5PA0A1B0GUS4 154 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 IGHV3-43DP0DP04 118 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 ZNF787Q6DD87 383 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 S100A7AQ86SG5 101 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 Q8IYB0 196 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 SCGB1C1Q8TD33 95 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 MRGPRDQ8TDS7 321 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 DCTN5Q9BTE1 182 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 HIPK2Q9H2X6 1198 aa8.72□□□□□ -1.01
CLSTN1-203ENST00000435891 TMEM210A6NLX4 147 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 C17orf98A8MV24 154 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 BRS3P32247 399 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 SSTR5P35346 364 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 CCL11P51671 97 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 FOXF2Q12947 444 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 LRRC75BQ2VPJ9 315 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 SPINK9Q5DT21 86 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 ZNF709Q8N972 641 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 FDCSPQ8NFU4 85 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 RFESDQ8TAC1 157 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 CIB3Q96Q77 187 aaPredicted RBP8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 RBKSQ9H477 322 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 HES4Q9HCC6 221 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 CLN8Q9UBY8 286 aa8.71□□□□□ -1.01
CLSTN1-203ENST00000435891 C1QTNF9BB2RNN3 333 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 S1PR2O95136 353 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 HBZP02008 142 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 WT1P19544 449 aaPredicted RBP8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 RBX1P62877 108 aa8.71□□□□□ -1.02
CLSTN1-203ENST00000435891 MRPL49Q13405 166 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms