RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CNIH2Q6PI25 160 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 ZNF645Q8N7E2 425 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 C5orf30Q96GV9 206 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 SLA2Q9H6Q3 261 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 ZNF355PQ9NSJ1 428 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 ANXA10Q9UJ72 324 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 OR2W1Q9Y3N9 320 aa13.66□□□□□ -0.22
NUP50-208ENST00000430547 TRAV18A0A075B6X5 111 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 A0A0A6YYH2 397 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 A6NJ64 397 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 TMEM127O75204 238 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 SLC22A5O76082 557 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 CRYZL1O95825 349 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 DUTP33316 252 aaKnown RBP13.65□□□□□ -0.22
NUP50-208ENST00000430547 ARPC4P59998 168 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 VMA21Q3ZAQ7 101 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 CROCCP3Q8IVE0 287 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 TSPAN14Q8NG11 270 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 OR5H6Q8NGV6 325 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 MS4A10Q96PG2 267 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 DIABLOQ9NR28 239 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 PRELID3BQ9Y3B1 194 aa13.65□□□□□ -0.22
NUP50-208ENST00000430547 AIREO43918 545 aa13.64□□□□□ -0.23
NUP50-208ENST00000430547 SSX5O60225 188 aa13.64□□□□□ -0.23
NUP50-208ENST00000430547 IGLV2-23P01705 113 aa13.64□□□□□ -0.23
NUP50-208ENST00000430547 TRGV3P03979 118 aa13.64□□□□□ -0.23
NUP50-208ENST00000430547 LGALS1P09382 135 aaKnown RBP13.64□□□□□ -0.23
NUP50-208ENST00000430547 KCTD9Q7L273 389 aa13.64□□□□□ -0.23
NUP50-208ENST00000430547 SLC25A38Q96DW6 304 aa13.64□□□□□ -0.23
NUP50-208ENST00000430547 DCUN1D5Q9BTE7 237 aa13.64□□□□□ -0.23
NUP50-208ENST00000430547 ALX4Q9H161 411 aaPredicted RBP13.64□□□□□ -0.23
NUP50-208ENST00000430547 SPATA2Q9UM82 520 aa13.64□□□□□ -0.23
NUP50-208ENST00000430547 MRPS7Q9Y2R9 242 aaKnown RBP13.64□□□□□ -0.23
NUP50-208ENST00000430547 LINC00473A8K010 186 aa13.63□□□□□ -0.23
NUP50-208ENST00000430547 LINC01619G3V211 115 aa13.63□□□□□ -0.23
NUP50-208ENST00000430547 ARPC1BO15143 372 aaKnown RBP13.63□□□□□ -0.23
NUP50-208ENST00000430547 TUSC2O75896 110 aa13.63□□□□□ -0.23
NUP50-208ENST00000430547 IGHV3-11P01762 117 aa13.63□□□□□ -0.23
NUP50-208ENST00000430547 HLA-DQB1P01920 261 aa13.63□□□□□ -0.23
NUP50-208ENST00000430547 PJVKQ0ZLH3 352 aa13.63□□□□□ -0.23
NUP50-208ENST00000430547 BEST4Q8NFU0 473 aa13.63□□□□□ -0.23
NUP50-208ENST00000430547 OSR1Q8TAX0 266 aaPredicted RBP13.63□□□□□ -0.23
NUP50-208ENST00000430547 DDB2Q92466 427 aa13.63□□□□□ -0.23
NUP50-208ENST00000430547 PHB2Q99623 299 aa13.63□□□□□ -0.23
NUP50-208ENST00000430547 H3BUA1 57 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 OVOL1O14753 267 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 CREBL2O60519 120 aaPredicted RBP13.62□□□□□ -0.23
NUP50-208ENST00000430547 FCGR3BO75015 233 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 CRYGBP07316 175 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 ECI1P42126 302 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 INSL3P51460 131 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 UBE2KP61086 200 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 TNXAQ16473 311 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 ASPHD1Q5U4P2 390 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 TEX45Q8NA69 505 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 POC5Q8NA72 575 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 OR5T1Q8NG75 326 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 ACOT12Q8WYK0 555 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 DCUN1D4Q92564 292 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 TMEM68Q96MH6 324 aa13.62□□□□□ -0.23
NUP50-208ENST00000430547 RBMX2Q9Y388 322 aaKnown RBP13.62□□□□□ -0.23
NUP50-208ENST00000430547 C13orf42A0A1B0GVH6 325 aa13.61□□□□□ -0.23
NUP50-208ENST00000430547 SRRM4A7MD48 611 aaKnown RBP13.61□□□□□ -0.23
NUP50-208ENST00000430547 ACTL6BO94805 426 aa13.61□□□□□ -0.23
NUP50-208ENST00000430547 SLURP1P55000 103 aa13.61□□□□□ -0.23
NUP50-208ENST00000430547 LSM3P62310 102 aaKnown RBP13.61□□□□□ -0.23
NUP50-208ENST00000430547 CD69Q07108 199 aa13.61□□□□□ -0.23
NUP50-208ENST00000430547 TCTEX1D2Q8WW35 142 aa13.61□□□□□ -0.23
NUP50-208ENST00000430547 HSD17B10Q99714 261 aaKnown RBP13.61□□□□□ -0.23
NUP50-208ENST00000430547 IGHV4OR15-8A0A075B7B6 117 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 A0A087WW49 117 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 IGKV1D-13A0A0B4J2D9 117 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 A0A0G2JLM5 398 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 MPPED1O15442 326 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 SAP30O75446 220 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 HSPB1P04792 205 aaKnown RBP13.6□□□□□ -0.23
NUP50-208ENST00000430547 IGKV1-13P0DP09 117 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 TGFBR1P36897 503 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 CBX5P45973 191 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 SSBP2P81877 361 aaPredicted RBP13.6□□□□□ -0.23
NUP50-208ENST00000430547 OR2B11Q5JQS5 317 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 IDO2Q6ZQW0 420 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 ZNF429Q86V71 674 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 HOGA1Q86XE5 327 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 GVQW1Q8N7I0 195 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 OR4S2Q8NH73 311 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 YIPF6Q96EC8 236 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 S100A16Q96FQ6 103 aaKnown RBP13.6□□□□□ -0.23
NUP50-208ENST00000430547 AUNIPQ9H7T9 357 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 IFT46Q9NQC8 304 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 COA4Q9NYJ1 87 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 SCOCQ9UIL1 159 aa13.6□□□□□ -0.23
NUP50-208ENST00000430547 TNCP24821 2201 aa13.59□□□□□ -0.23
NUP50-208ENST00000430547 LY86O95711 162 aa13.59□□□□□ -0.23
NUP50-208ENST00000430547 FCGR2CP31995 323 aa13.59□□□□□ -0.23
NUP50-208ENST00000430547 CDK10Q15131 360 aa13.59□□□□□ -0.23
NUP50-208ENST00000430547 PRSS8Q16651 343 aa13.59□□□□□ -0.23
NUP50-208ENST00000430547 UBE2NLQ5JXB2 153 aa13.59□□□□□ -0.23
NUP50-208ENST00000430547 OVCH2Q7RTZ1 564 aa13.59□□□□□ -0.23
NUP50-208ENST00000430547 SECTM1Q8WVN6 248 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms