RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 KLK15Q9H2R5 256 aa16.14■□□□□ 0.17
HSPG2-205ENST00000427897 NOTCH1P46531 2555 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 IGKV1D-8A0A087WSZ0 117 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 A0A0A6YYH2 397 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 A6NJ64 397 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 ARPC4P59998 168 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 ACTBL2Q562R1 376 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 DEFB121Q5J5C9 76 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 UBE2NLQ5JXB2 153 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 CNIH2Q6PI25 160 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 SAMD12Q8N8I0 201 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 ZNF491Q8N8L2 437 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 OR11H1Q8NG94 326 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 DCUN1D5Q9BTE7 237 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 FAM103A1Q9BTL3 118 aaKnown RBP16.13■□□□□ 0.17
HSPG2-205ENST00000427897 ZNF355PQ9NSJ1 428 aa16.13■□□□□ 0.17
HSPG2-205ENST00000427897 CCDC59Q9P031 241 aaKnown RBP16.13■□□□□ 0.17
HSPG2-205ENST00000427897 SLC22A5O76082 557 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 IGLV1-40P01703 118 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 NFYAP23511 347 aaPredicted RBP16.12■□□□□ 0.17
HSPG2-205ENST00000427897 FXYD3Q14802 87 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 PYHIN1Q6K0P9 492 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 MINDY2Q8NBR6 621 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 GRPEL2Q8TAA5 225 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 DYNC2LI1Q8TCX1 351 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 ARPC1AQ92747 370 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 SLC25A38Q96DW6 304 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 CMTM3Q96MX0 182 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 ANXA10Q9UJ72 324 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 OR2W1Q9Y3N9 320 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 NUBP2Q9Y5Y2 271 aa16.12■□□□□ 0.17
HSPG2-205ENST00000427897 TUSC2O75896 110 aa16.11■□□□□ 0.17
HSPG2-205ENST00000427897 AKIRIN2Q53H80 203 aa16.11■□□□□ 0.17
HSPG2-205ENST00000427897 ZNF645Q8N7E2 425 aa16.11■□□□□ 0.17
HSPG2-205ENST00000427897 LFNGQ8NES3 379 aa16.11■□□□□ 0.17
HSPG2-205ENST00000427897 OR1N2Q8NGR9 330 aa16.11■□□□□ 0.17
HSPG2-205ENST00000427897 S100A16Q96FQ6 103 aaKnown RBP16.11■□□□□ 0.17
HSPG2-205ENST00000427897 COMMD3Q9UBI1 195 aa16.11■□□□□ 0.17
HSPG2-205ENST00000427897 PRELID3BQ9Y3B1 194 aa16.11■□□□□ 0.17
HSPG2-205ENST00000427897 FBXO7Q9Y3I1 522 aa16.11■□□□□ 0.17
HSPG2-205ENST00000427897 OR8U8P0C7N1 319 aa16.1■□□□□ 0.17
HSPG2-205ENST00000427897 NDPQ00604 133 aa16.1■□□□□ 0.17
HSPG2-205ENST00000427897 VMA21Q3ZAQ7 101 aa16.1■□□□□ 0.17
HSPG2-205ENST00000427897 C9orf66Q5T8R8 295 aa16.1■□□□□ 0.17
HSPG2-205ENST00000427897 MS4A10Q96PG2 267 aa16.1■□□□□ 0.17
HSPG2-205ENST00000427897 GNB4Q9HAV0 340 aa16.1■□□□□ 0.17
HSPG2-205ENST00000427897 SSX5O60225 188 aa16.09■□□□□ 0.17
HSPG2-205ENST00000427897 CRYZL1O95825 349 aa16.09■□□□□ 0.17
HSPG2-205ENST00000427897 APOA1P02647 267 aa16.09■□□□□ 0.17
HSPG2-205ENST00000427897 DUTP33316 252 aaKnown RBP16.09■□□□□ 0.17
HSPG2-205ENST00000427897 CRIP2P52943 208 aaPredicted RBP16.09■□□□□ 0.17
HSPG2-205ENST00000427897 ZNF616Q08AN1 781 aa16.09■□□□□ 0.17
HSPG2-205ENST00000427897 TMEM177Q53S58 311 aa16.09■□□□□ 0.17
HSPG2-205ENST00000427897 BEST4Q8NFU0 473 aa16.09■□□□□ 0.17
HSPG2-205ENST00000427897 CASTOR1Q8WTX7 329 aa16.09■□□□□ 0.17
HSPG2-205ENST00000427897 DGCR14Q96DF8 476 aaKnown RBP16.09■□□□□ 0.17
HSPG2-205ENST00000427897 PHB2Q99623 299 aa16.09■□□□□ 0.17
HSPG2-205ENST00000427897 TPSG1Q9NRR2 321 aa16.09■□□□□ 0.17
HSPG2-205ENST00000427897 MRPS7Q9Y2R9 242 aaKnown RBP16.09■□□□□ 0.17
HSPG2-205ENST00000427897 SEC14L6B5MCN3 397 aa16.08■□□□□ 0.16
HSPG2-205ENST00000427897 EGR2P11161 476 aaPredicted RBP16.08■□□□□ 0.16
HSPG2-205ENST00000427897 TPPP2P59282 170 aa16.08■□□□□ 0.16
HSPG2-205ENST00000427897 KCTD9Q7L273 389 aa16.08■□□□□ 0.16
HSPG2-205ENST00000427897 DPPA5A6NC42 116 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 FCGR3BO75015 233 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 ACTL6BO94805 426 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 HLA-DQB1P01920 261 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 FCER2P06734 321 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 CBX5P45973 191 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 KRTAP10-11P60412 298 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 DGCR2P98153 550 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 MYOZ3Q8TDC0 251 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 SLA2Q9H6Q3 261 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 AUNIPQ9H7T9 357 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 IFT46Q9NQC8 304 aa16.07■□□□□ 0.16
HSPG2-205ENST00000427897 I3L521 148 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 XRCC3O43542 346 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 SOX15O60248 233 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 TRGV3P03979 118 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 RUNX1Q01196 453 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 EGFEM1PQ0D2K5 195 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 OR2B11Q5JQS5 317 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 TMEM69Q5SWH9 247 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 HOGA1Q86XE5 327 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 GVQW1Q8N7I0 195 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 OR5T1Q8NG75 326 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 OSR1Q8TAX0 266 aaPredicted RBP16.06■□□□□ 0.16
HSPG2-205ENST00000427897 TCTEX1D2Q8WW35 142 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 C5orf30Q96GV9 206 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 ADAM30Q9UKF2 790 aa16.06■□□□□ 0.16
HSPG2-205ENST00000427897 RBMX2Q9Y388 322 aaKnown RBP16.06■□□□□ 0.16
HSPG2-205ENST00000427897 LINC00473A8K010 186 aa16.05■□□□□ 0.16
HSPG2-205ENST00000427897 ARPC1BO15143 372 aaKnown RBP16.05■□□□□ 0.16
HSPG2-205ENST00000427897 MPPED1O15442 326 aa16.05■□□□□ 0.16
HSPG2-205ENST00000427897 CREBL2O60519 120 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-205ENST00000427897 RAMP3O60896 148 aa16.05■□□□□ 0.16
HSPG2-205ENST00000427897 IGLV2-23P01705 113 aa16.05■□□□□ 0.16
HSPG2-205ENST00000427897 PJVKQ0ZLH3 352 aa16.05■□□□□ 0.16
HSPG2-205ENST00000427897 KIAA0141Q14154 515 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-205ENST00000427897 TNXAQ16473 311 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms