RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 SHOXO15266 292 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 RRASP10301 218 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 KLF5Q13887 457 aaPredicted RBP13.57□□□□□ -0.24
GPC1-203ENST00000425056 RTL8BQ17RB0 113 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 MRGPRG-AS1Q2M3A8 158 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 CASC10Q5T4H9 136 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 ANKRD13BQ86YJ7 626 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 Q8N1Y9 231 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 BVESQ8NE79 360 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 MAFIPQ8WZ33 124 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 DDB2Q92466 427 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 RSRP1Q9BUV0 290 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 TINAGL1Q9GZM7 467 aaPredicted RBP13.57□□□□□ -0.24
GPC1-203ENST00000425056 ZMAT4Q9H898 229 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 NDUFB11Q9NX14 153 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 BLOC1S6Q9UL45 172 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 TNCP24821 2201 aa13.57□□□□□ -0.24
GPC1-203ENST00000425056 SRRM4A7MD48 611 aaKnown RBP13.56□□□□□ -0.24
GPC1-203ENST00000425056 A8MZ25 164 aa13.56□□□□□ -0.24
GPC1-203ENST00000425056 IGHV4-30-4P0DP06 118 aa13.56□□□□□ -0.24
GPC1-203ENST00000425056 AADACP22760 399 aa13.56□□□□□ -0.24
GPC1-203ENST00000425056 MYL9P24844 172 aa13.56□□□□□ -0.24
GPC1-203ENST00000425056 Q6ZS49 121 aa13.56□□□□□ -0.24
GPC1-203ENST00000425056 OR9G4Q8NGQ1 327 aa13.56□□□□□ -0.24
GPC1-203ENST00000425056 TM2D3Q9BRN9 247 aa13.56□□□□□ -0.24
GPC1-203ENST00000425056 GINS4Q9BRT9 223 aa13.56□□□□□ -0.24
GPC1-203ENST00000425056 YTHDF1Q9BYJ9 559 aaKnown RBP13.56□□□□□ -0.24
GPC1-203ENST00000425056 ZNF230Q9UIE0 474 aaPredicted RBP13.56□□□□□ -0.24
GPC1-203ENST00000425056 A0A075B6Q4 140 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 ANKRD34BA5PLL1 514 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 UBE2KP61086 200 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 DEFA5Q01523 94 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 DYRK1AQ13627 763 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 ZNF343Q6P1L6 599 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 H1FOOQ8IZA3 346 aaPredicted RBP13.55□□□□□ -0.24
GPC1-203ENST00000425056 USMG5Q96IX5 58 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 ADTRPQ96IZ2 230 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 CENPOQ9BU64 300 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 C19orf73Q9NVV2 129 aa13.55□□□□□ -0.24
GPC1-203ENST00000425056 RBM7Q9Y580 266 aaKnown RBP13.55□□□□□ -0.24
GPC1-203ENST00000425056 TRDV1A0A1B0GX56 115 aa13.54□□□□□ -0.24
GPC1-203ENST00000425056 RAB3BP20337 219 aa13.54□□□□□ -0.24
GPC1-203ENST00000425056 GALP22466 123 aa13.54□□□□□ -0.24
GPC1-203ENST00000425056 DUTP33316 252 aaKnown RBP13.54□□□□□ -0.24
GPC1-203ENST00000425056 VMA21Q3ZAQ7 101 aa13.54□□□□□ -0.24
GPC1-203ENST00000425056 IL34Q6ZMJ4 242 aa13.54□□□□□ -0.24
GPC1-203ENST00000425056 NR2C2APQ86WQ0 139 aa13.54□□□□□ -0.24
GPC1-203ENST00000425056 TEX45Q8NA69 505 aa13.54□□□□□ -0.24
GPC1-203ENST00000425056 ADAD2Q8NCV1 583 aaKnown RBP13.54□□□□□ -0.24
GPC1-203ENST00000425056 CITED4Q96RK1 184 aa13.54□□□□□ -0.24
GPC1-203ENST00000425056 COA4Q9NYJ1 87 aa13.54□□□□□ -0.24
GPC1-203ENST00000425056 PEF1Q9UBV8 284 aaKnown RBP13.54□□□□□ -0.24
GPC1-203ENST00000425056 DYNC2H1Q8NCM8 4307 aaKnown RBP13.53□□□□□ -0.24
GPC1-203ENST00000425056 IGKV1D-8A0A087WSZ0 117 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 A0A0B4J203 849 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 METTL21EPA6NDL7 271 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 LINC00473A8K010 186 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 CRYZL1O95825 349 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 TRBV12-3P01733 135 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 DTYMKP23919 212 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 SYNJ2BPP57105 145 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 ARFRP1Q13795 201 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 PRSS8Q16651 343 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 SGPP2Q8IWX5 399 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 OSR1Q8TAX0 266 aaPredicted RBP13.53□□□□□ -0.24
GPC1-203ENST00000425056 SRSF12Q8WXF0 261 aaKnown RBP13.53□□□□□ -0.24
GPC1-203ENST00000425056 PHB2Q99623 299 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 SIGLEC8Q9NYZ4 499 aa13.53□□□□□ -0.24
GPC1-203ENST00000425056 MSGN1A6NI15 193 aa13.52□□□□□ -0.25
GPC1-203ENST00000425056 RBMXL2O75526 392 aaKnown RBP13.52□□□□□ -0.25
GPC1-203ENST00000425056 OR9G9P0C7N8 305 aa13.52□□□□□ -0.25
GPC1-203ENST00000425056 APELAP0DMC3 54 aa13.52□□□□□ -0.25
GPC1-203ENST00000425056 TALDO1P37837 337 aa13.52□□□□□ -0.25
GPC1-203ENST00000425056 ARL6IP1Q15041 203 aa13.52□□□□□ -0.25
GPC1-203ENST00000425056 TNXAQ16473 311 aa13.52□□□□□ -0.25
GPC1-203ENST00000425056 IDO2Q6ZQW0 420 aa13.52□□□□□ -0.25
GPC1-203ENST00000425056 THAP7Q9BT49 309 aaPredicted RBP13.52□□□□□ -0.25
GPC1-203ENST00000425056 ADAM30Q9UKF2 790 aa13.52□□□□□ -0.25
GPC1-203ENST00000425056 H0Y980 276 aa13.51□□□□□ -0.25
GPC1-203ENST00000425056 OR2A4O95047 310 aa13.51□□□□□ -0.25
GPC1-203ENST00000425056 LYL1P12980 280 aa13.51□□□□□ -0.25
GPC1-203ENST00000425056 GABARAPL2P60520 117 aa13.51□□□□□ -0.25
GPC1-203ENST00000425056 C22orf42Q6IC83 251 aa13.51□□□□□ -0.25
GPC1-203ENST00000425056 ZNF645Q8N7E2 425 aa13.51□□□□□ -0.25
GPC1-203ENST00000425056 ELF5Q9UKW6 265 aaPredicted RBP13.51□□□□□ -0.25
GPC1-203ENST00000425056 FAM223BA6NKX1 122 aa13.5□□□□□ -0.25
GPC1-203ENST00000425056 CREBL2O60519 120 aaPredicted RBP13.5□□□□□ -0.25
GPC1-203ENST00000425056 MRPS14O60783 128 aaKnown RBP13.5□□□□□ -0.25
GPC1-203ENST00000425056 CSN3P07498 182 aa13.5□□□□□ -0.25
GPC1-203ENST00000425056 SAA1P0DJI8 122 aaPredicted RBP13.5□□□□□ -0.25
GPC1-203ENST00000425056 CDK10Q15131 360 aa13.5□□□□□ -0.25
GPC1-203ENST00000425056 RPEL1Q2QD12 228 aa13.5□□□□□ -0.25
GPC1-203ENST00000425056 LCN12Q6JVE5 192 aa13.5□□□□□ -0.25
GPC1-203ENST00000425056 FAM223AQ8IWN6 122 aa13.5□□□□□ -0.25
GPC1-203ENST00000425056 ACOT12Q8WYK0 555 aa13.5□□□□□ -0.25
GPC1-203ENST00000425056 ATG5Q9H1Y0 275 aa13.5□□□□□ -0.25
GPC1-203ENST00000425056 ZNF430Q9H8G1 570 aaPredicted RBP13.5□□□□□ -0.25
GPC1-203ENST00000425056 TENM2Q9NT68 2774 aa13.5□□□□□ -0.25
GPC1-203ENST00000425056 TRBV9A0A0B4J1U6 114 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 TNFAIP8O95379 198 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms