RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SPAARA0A1B0GVQ0 90 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 A0A1W2PRS3 328 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 IGLC7A0M8Q6 106 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 IRGMA1A4Y4 181 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 TLCD2A6NGC4 264 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 H3BN98 237 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 FAAHO00519 579 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 XKRYO14609 159 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 TAX1BP3O14907 124 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 FCMRO60667 390 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 REM1O75628 298 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 GLSO94925 669 aaPredicted RBP2.2□□□□□ -2.06
LINC01040-201ENST00000425048 LRATO95237 230 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 MT-ATP6P00846 226 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 UROSP10746 265 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 MMP11P24347 488 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 IMPA1P29218 277 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 RPL4P36578 427 aaKnown RBP2.2□□□□□ -2.06
LINC01040-201ENST00000425048 PPICP45877 212 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 SLC6A8P48029 635 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 LHX2P50458 406 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 OR12D2P58182 307 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 TAS2R30P59541 319 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 S100A10P60903 97 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 RAB11AP62491 216 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 BTN3A2P78410 334 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 CDK5Q00535 292 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 DHRS2Q13268 280 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 ARHGAP11BQ3KRB8 267 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 UBE2NLQ5JXB2 153 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 NCBP2-AS2Q69YL0 99 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 FAM71F2Q6NXP2 309 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 LEG1Q6P5S2 330 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 DNM1P34Q6PK57 102 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 NEGR1Q7Z3B1 354 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 NIT1Q86X76 327 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 TUSC5Q8IXB3 177 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF101Q8IZC7 436 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 FAM71E2Q8N5Q1 922 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 Q8N976 141 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 SLC26A10Q8NG04 563 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 OR2T33Q8NG76 320 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 OR10G3Q8NGC4 313 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 OR4K14Q8NGD5 310 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 OR9K2Q8NGE7 335 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 OR6N1Q8NGY5 312 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 OR2T27Q8NH04 317 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 OR51F2Q8NH61 342 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 GPX8Q8TED1 209 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 PPP1R1CQ8WVI7 109 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 DNAJB3Q8WWF6 145 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 RLN3Q8WXF3 142 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 PPCDCQ96CD2 204 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 HAVCR1Q96D42 359 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 MS4A6EQ96DS6 147 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 MRPL53Q96EL3 112 aaKnown RBP2.2□□□□□ -2.06
LINC01040-201ENST00000425048 ACY3Q96HD9 319 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 CIB3Q96Q77 187 aaPredicted RBP2.2□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF607Q96SK3 696 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 GPR21Q99679 349 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 CITED1Q99966 193 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 SNRNP25Q9BV90 132 aaKnown RBP2.2□□□□□ -2.06
LINC01040-201ENST00000425048 CHST6Q9GZX3 395 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 RAB1BQ9H0U4 201 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 SLC35B3Q9H1N7 401 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 CLMPQ9H6B4 373 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 LYRM2Q9NU23 88 aaPredicted RBP2.2□□□□□ -2.06
LINC01040-201ENST00000425048 ACER3Q9NUN7 267 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 TAS2R13Q9NYV9 303 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 AHSPQ9NZD4 102 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 ABRACLQ9P1F3 81 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 WRAP73Q9P2S5 460 aaPredicted RBP2.2□□□□□ -2.06
LINC01040-201ENST00000425048 P2RX2Q9UBL9 471 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 SHPKQ9UHJ6 478 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 JPT1Q9UK76 154 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 MMP17Q9ULZ9 603 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 MRPS16Q9Y3D3 137 aaKnown RBP2.2□□□□□ -2.06
LINC01040-201ENST00000425048 ADAMTSL1Q8N6G6 1762 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 DOCK3Q8IZD9 2030 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 OBSL1O75147 1896 aa2.2□□□□□ -2.06
LINC01040-201ENST00000425048 TNRC6AQ8NDV7 1962 aaKnown RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 PTPRDP23468 1912 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TRPM6Q9BX84 2022 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 COL18A1P39060 1754 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 IGLV3-22A0A075B6J6 115 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 IGHV2-26A0A0B4J1V2 119 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TRAV1-2A0A0B4J238 106 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ODAMA1E959 279 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 OR4C45A6NMZ5 311 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF705FA8MVS1 300 aaPredicted RBP2.19□□□□□ -2.06
LINC01040-201ENST00000425048 HIDE1A8MVS5 230 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 FTCDNL1E5RQL4 147 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 H3BQ15 152 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 J3QRE1 110 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 K7EPK0 472 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 HSD17B6O14756 317 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ARPC3O15145 178 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF208O43345 1280 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 HCRTR1O43613 425 aa2.19□□□□□ -2.06
LINC01040-201ENST00000425048 TBX19O60806 448 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms