RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	10.5	□□□□□ -0.73
SF1-206	ENST00000413725	CCDC71L	Q8N9Z2	235 aa		10.5	□□□□□ -0.73
SF1-206	ENST00000413725	OR13C8	Q8NGS7	320 aa		10.5	□□□□□ -0.73
SF1-206	ENST00000413725	OR51H1	Q8NH63	302 aa		10.5	□□□□□ -0.73
SF1-206	ENST00000413725	OR4S2	Q8NH73	311 aa		10.5	□□□□□ -0.73
SF1-206	ENST00000413725	MARCH1	Q8TCQ1	289 aa		10.5	□□□□□ -0.73
SF1-206	ENST00000413725	GPHA2	Q96T91	129 aa		10.5	□□□□□ -0.73
SF1-206	ENST00000413725	TSNAX	Q99598	290 aa	Known RBP	10.5	□□□□□ -0.73
SF1-206	ENST00000413725	SLC2A9	Q9NRM0	540 aa		10.5	□□□□□ -0.73
SF1-206	ENST00000413725	LIN7C	Q9NUP9	197 aa	Known RBP	10.5	□□□□□ -0.73
SF1-206	ENST00000413725	KIAA1456	Q9P272	454 aa		10.5	□□□□□ -0.73
SF1-206	ENST00000413725	LINC00854	A0A1B0GVQ3	168 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	SHOX	O15266	292 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	NBR2	O15453	112 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	PGLYRP1	O75594	196 aa	Predicted RBP	10.49	□□□□□ -0.73
SF1-206	ENST00000413725	NDUFA7	O95182	113 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	SPDEF	O95238	335 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	IGKV1-16	P04430	117 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	CTSD	P07339	412 aa	Predicted RBP	10.49	□□□□□ -0.73
SF1-206	ENST00000413725	HKR1	P10072	659 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	RAG2	P55895	527 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	PIGP	P57054	158 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	RND3	P61587	244 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	RPS16	P62249	146 aa	Known RBP	10.49	□□□□□ -0.73
SF1-206	ENST00000413725	KRTAP24-1	Q3LI83	254 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	TMEM177	Q53S58	311 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	C5orf56	Q8N8D9	126 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	OR4F5	Q8NH21	305 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	OSR1	Q8TAX0	266 aa	Predicted RBP	10.49	□□□□□ -0.73
SF1-206	ENST00000413725	CD300LF	Q8TDQ1	290 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	HARBI1	Q96MB7	349 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	PRSS22	Q9GZN4	317 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	COPZ2	Q9P299	210 aa		10.49	□□□□□ -0.73
SF1-206	ENST00000413725	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.48	□□□□□ -0.73	9e-11	■■■■■ 27.3
SF1-206	ENST00000413725	PEX14	O75381	377 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	UPK1B	O75841	260 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	PI3	P19957	117 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	LGALS7	P47929	136 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	F2RL1	P55085	397 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	PLGLA	Q15195	96 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.48	□□□□□ -0.73
SF1-206	ENST00000413725	C11orf88	Q6PI97	169 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	TBC1D26	Q86UD7	250 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	SPAG16	Q8N0X2	631 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	TCTEX1D1	Q8N7M0	179 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725		Q8N9W7	124 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	NPB	Q8NG41	125 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	MRGPRF	Q96AM1	343 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	RBMXL1	Q96E39	390 aa	Known RBP	10.48	□□□□□ -0.73
SF1-206	ENST00000413725	RASL11B	Q9BPW5	248 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.48	□□□□□ -0.73
SF1-206	ENST00000413725	C19orf24	Q9BVV8	132 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	PLSCR3	Q9NRY6	295 aa		10.48	□□□□□ -0.73
SF1-206	ENST00000413725	COL6A5	A8TX70	2615 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	TET2	Q6N021	2002 aa	Predicted RBP	10.47	□□□□□ -0.73
SF1-206	ENST00000413725	RRH	O14718	337 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	LYRM1	O43325	122 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	TSPAN9	O75954	239 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	NDUFA3	O95167	84 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	F2R	P25116	425 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	CNTFR	P26992	372 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	FOXL1	Q12952	345 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	RBMS2	Q15434	407 aa	Known RBP	10.47	□□□□□ -0.73
SF1-206	ENST00000413725	C9orf152	Q5JTZ5	239 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725		Q6ZSV7	163 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	FAM71E2	Q8N5Q1	922 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	OR2T6	Q8NHC8	308 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	RITA1	Q96K30	269 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	AIFM2	Q9BRQ8	373 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.47	□□□□□ -0.73
SF1-206	ENST00000413725	GPR132	Q9UNW8	380 aa		10.47	□□□□□ -0.73
SF1-206	ENST00000413725		A0A1B0GUS0	222 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	MPPED1	O15442	326 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	HRAS	P01112	189 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	AMY1A	P04745	511 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	BLCAP	P62952	87 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	RELB	Q01201	579 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	PSG5	Q15238	335 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	C5orf64	Q2M2E5	130 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	VMA21	Q3ZAQ7	101 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	MZT2B	Q6NZ67	158 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	TSC22D3	Q99576	134 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.46	□□□□□ -0.73
SF1-206	ENST00000413725	C5orf66	Q9H5L9	145 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	C16orf95	Q9H693	158 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	ZNF702P	Q9H963	129 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	BEX1	Q9HBH7	125 aa		10.46	□□□□□ -0.73
SF1-206	ENST00000413725	METTL1	Q9UBP6	276 aa	Known RBP	10.46	□□□□□ -0.73
SF1-206	ENST00000413725	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.45	□□□□□ -0.74
SF1-206	ENST00000413725	TMEM89	A2RUT3	159 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725		H0Y980	276 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725	PLA2G10	O15496	165 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725	SLC25A17	O43808	307 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725	RAMP3	O60896	148 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725	B3GALNT1	O75752	331 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725	HPRT1	P00492	218 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725	CCR6	P51684	374 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725	BRWD1-AS2	P59051	145 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725	ERVK-16	P61578	105 aa		10.45	□□□□□ -0.74
SF1-206	ENST00000413725	LIN54	Q6MZP7	749 aa		10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms