RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 CISD2Q8N5K1 135 aaKnown RBP13.91□□□□□ -0.18
LIMS2-208ENST00000410011 IMMP2LQ96T52 175 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 TNRC18O15417 2968 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-208ENST00000410011 IGHV3-64DA0A0J9YX35 117 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 HMGB3O15347 200 aaKnown RBP13.9□□□□□ -0.18
LIMS2-208ENST00000410011 HPRT1P00492 218 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 CD1BP29016 333 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 MZT1Q08AG7 82 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 FOXF2Q12947 444 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 GAMTQ14353 236 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 FAM53AQ6NSI3 398 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-208ENST00000410011 BTNL3Q6UXE8 466 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 OR13A1Q8NGR1 328 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 USF3Q68DE3 2245 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 RBFOX2O43251 390 aaKnown RBP eCLIP13.9□□□□□ -0.18
LIMS2-208ENST00000410011 DUTP33316 252 aaKnown RBP13.9□□□□□ -0.18
LIMS2-208ENST00000410011 TNFSF10P50591 281 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 MBNL2Q5VZF2 373 aaKnown RBP13.9□□□□□ -0.18
LIMS2-208ENST00000410011 OR2T10Q8NGZ9 312 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 GATAD1Q8WUU5 269 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 R3HDM4Q96D70 268 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 GAB2Q9UQC2 676 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 FREM2Q5SZK8 3169 aa13.9□□□□□ -0.18
LIMS2-208ENST00000410011 C11orf94C9JXX5 98 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 CDX4O14627 284 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-208ENST00000410011 SSTR5P35346 364 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 SPCS3P61009 180 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 ACTL10Q5JWF8 245 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 OR6C3Q9NZP0 311 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 TSTD3H0UI37 97 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 RBMXL2O75526 392 aaKnown RBP13.89□□□□□ -0.19
LIMS2-208ENST00000410011 AMBPP02760 352 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 NPPCP23582 126 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 HOXC12P31275 282 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 ZNF718Q3SXZ3 478 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 Q3ZCU0 254 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 KCNIP4Q6PIL6 250 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 CXorf67Q86X51 503 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-208ENST00000410011 FAM90A1Q86YD7 464 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 PCGF1Q9BSM1 259 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 KCNIP2Q9NS61 270 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 JPT1Q9UK76 154 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 PSG11Q9UQ72 335 aa13.89□□□□□ -0.19
LIMS2-208ENST00000410011 F6UZH7 168 aa13.88□□□□□ -0.19
LIMS2-208ENST00000410011 TIMM8AO60220 97 aaPredicted RBP13.88□□□□□ -0.19
LIMS2-208ENST00000410011 IGLV1-44P01699 117 aa13.88□□□□□ -0.19
LIMS2-208ENST00000410011 RD3LP0DJH9 198 aa13.88□□□□□ -0.19
LIMS2-208ENST00000410011 OPRK1P41145 380 aa13.88□□□□□ -0.19
LIMS2-208ENST00000410011 C14orf144Q96I85 54 aa13.88□□□□□ -0.19
LIMS2-208ENST00000410011 QTRT1Q9BXR0 403 aaKnown RBP13.88□□□□□ -0.19
LIMS2-208ENST00000410011 CHODLQ9H9P2 273 aa13.88□□□□□ -0.19
LIMS2-208ENST00000410011 FRYLO94915 3013 aa13.88□□□□□ -0.19
LIMS2-208ENST00000410011 MKRN2OSH3BPM6 223 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 YPEL1O60688 119 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 CFHR2P36980 270 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 NUBP1P53384 320 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 PMP22Q01453 160 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 HNF4GQ14541 408 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 PRAMEF6Q5VXH4 476 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 YPEL2Q96QA6 119 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 DMDP11532 3685 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 XKRY2A2RUG3 117 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 ST8SIA5O15466 376 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 PROP1O75360 226 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 GCGP01275 180 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 OR9G9P0C7N8 305 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 KIR2DL2P43627 348 aaPredicted RBP13.87□□□□□ -0.19
LIMS2-208ENST00000410011 FOXL1Q12952 345 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 REC114Q7Z4M0 266 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 LINC01551Q86U37 167 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 GCNT2Q8N0V5 402 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 CD177Q8N6Q3 437 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 FAM169BQ8N8A8 192 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 NECAP1Q8NC96 275 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 S100PBPQ96BU1 408 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 FAM186AA6NE01 2351 aa13.87□□□□□ -0.19
LIMS2-208ENST00000410011 SP9P0CG40 484 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 GZMBP10144 247 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 DDTP30046 118 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 PRDX2P32119 198 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 GPR12P47775 334 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 TRIB1Q96RU8 372 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 ELOVL1Q9BW60 279 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 UFSP2Q9NUQ7 469 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 GTF3C1Q12789 2109 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 A0A1W2PPQ1 181 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 PRSS46E5RG02 174 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 GCH1P30793 250 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 PLA2G5P39877 138 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 VDAC2P45880 294 aaPredicted RBP13.86□□□□□ -0.19
LIMS2-208ENST00000410011 RTP5Q14D33 572 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 MORN2Q502X0 79 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 HES3Q5TGS1 186 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 COLQQ9Y215 455 aaPredicted RBP13.86□□□□□ -0.19
LIMS2-208ENST00000410011 TECTAO75443 2155 aa13.86□□□□□ -0.19
LIMS2-208ENST00000410011 PTPRBP23467 1997 aa13.85□□□□□ -0.19
LIMS2-208ENST00000410011 AQP7O14520 342 aa13.85□□□□□ -0.19
LIMS2-208ENST00000410011 ITGB1BP1O14713 200 aa13.85□□□□□ -0.19
LIMS2-208ENST00000410011 CECR9P0C854 216 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms