RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 TMEM241Q24JQ0 296 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 RNF212Q495C1 297 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 FAM122BQ7Z309 247 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 Q96M66 194 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 TCEAL7Q9BRU2 100 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 TOLLIPQ9H0E2 274 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 LPAR5Q9H1C0 372 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 RCC2Q9P258 522 aaKnown RBP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 MOB4Q9Y3A3 225 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 ADAP1O75689 374 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 RPL7P18124 248 aaKnown RBP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 EWSR1Q01844 656 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 FAM53AQ6NSI3 398 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 RNASEKQ6P5S7 137 aaKnown RBP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 Q6ZN92 141 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 ZCCHC24Q8N2G6 241 aaKnown RBP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 TMEM116Q8NCL8 245 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 WFDC6Q9BQY6 131 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 TMEM133Q9H2Q1 129 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 ZSWIM8A7E2V4 1837 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 A0A1W2PPQ1 181 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 C11orf94C9JXX5 98 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 NPIPB6E9PJ23 425 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 TMEM262E9PQX1 116 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 NPIPB9F8W1W9 429 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 KBTBD11O94819 623 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 CSRP3P50461 194 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 TWIST1Q15672 202 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 WDR25Q64LD2 544 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 Q71RC1 249 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 MRPL20Q9BYC9 149 aaKnown RBP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 AKIP1Q9NQ31 210 aa4.24□□□□□ -1.73
SCN3A-203ENST00000409101 LYRM2Q9NU23 88 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-203ENST00000409101 TMSB15BA0A087X1C1 80 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 LILRA1O75019 489 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 C1QL1O75973 258 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 EMP1P54849 157 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 CMC4P56277 68 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 TMEM255AQ5JRV8 349 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 ZNF385CQ66K41 422 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 LHFPL5Q8TAF8 219 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 OSR1Q8TAX0 266 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 FAM131CQ96AQ9 280 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 FAM210BQ96KR6 192 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 DUX3Q96PT4 197 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 BEX4Q9NWD9 120 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 OPN4Q9UHM6 478 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 TRAPPC1Q9Y5R8 145 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 SLC25A15Q9Y619 301 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 IGHV3-66A0A0C4DH42 116 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 SPINK4O60575 86 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 PRB1P04280 392 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 RCC1P18754 421 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 G0S2P27469 103 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 TMEM177Q53S58 311 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 VKORC1L1Q8N0U8 176 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 RELL2Q8NC24 303 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 MRPL30Q8TCC3 161 aaKnown RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 RTN4RQ9BZR6 473 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 MMP26Q9NRE1 261 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 PXMP4Q9Y6I8 212 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 MARCH11A6NNE9 402 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 RPL35P42766 123 aaKnown RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 PRB3Q04118 309 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 TMEM97Q5BJF2 176 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 GGNQ86UU5 652 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 ZNF837Q96EG3 531 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 LINC01587Q99440 93 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 MESP1Q9BRJ9 268 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 REPIN1Q9BWE0 567 aaKnown RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 TMEM222Q9H0R3 208 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 ZNF586Q9NXT0 402 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 TRBV5-7A0A0A0MS05 114 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 A0A1W2PP11 408 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 TSTD3H0UI37 97 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 AP4M1O00189 453 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 ZNF207O43670 478 aaKnown RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 PDE6DO43924 150 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 ADAM11O75078 769 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 GATA3P23771 443 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 HERVK_113P61574 105 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 SAMD13Q5VXD3 122 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 IL36RNQ9UBH0 155 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 IGKV1D-43A0A0B4J1Z2 117 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 PITX3O75364 302 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 CRISP2P16562 243 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 GPR183P32249 361 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 MAS1LP35410 378 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 CX3CL1P78423 397 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 LDLRAD2Q5SZI1 272 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 WDR73Q6P4I2 378 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 SELENOHQ8IZQ5 122 aaKnown RBP4.23□□□□□ -1.73
SCN3A-203ENST00000409101 ZNF525Q8N782 197 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 TMEM18Q96B42 140 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 NAT8BQ9UHF3 227 aa4.23□□□□□ -1.73
SCN3A-203ENST00000409101 ATG2BQ96BY7 2078 aa4.22□□□□□ -1.73
SCN3A-203ENST00000409101 NPFFO15130 113 aa4.22□□□□□ -1.73
SCN3A-203ENST00000409101 CCL3L1P16619 93 aa4.22□□□□□ -1.73
SCN3A-203ENST00000409101 KLK2P20151 261 aa4.22□□□□□ -1.73
SCN3A-203ENST00000409101 IRF3Q14653 427 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms