RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 LINC00312Q9Y6C7 94 aa14.66□□□□□ -0.06
HLA-DQB1-204ENST00000399084 MPDU1O75352 247 aa14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 MT-ND4LP03901 98 aa14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 OR4A8P0C604 315 aa14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 NFYBP25208 207 aa14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 ICAM4Q14773 271 aa14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 POU2AF1Q16633 256 aa14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 AWAT1Q58HT5 328 aa14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 FAM53AQ6NSI3 398 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 RBMS3Q6XE24 437 aaKnown RBP14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 WFDC8Q8IUA0 241 aa14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 SNRNP40Q96DI7 357 aaKnown RBP14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 RSG1Q9BU20 258 aa14.65□□□□□ -0.06
HLA-DQB1-204ENST00000399084 LOC102723971A0A1B0GUV8 181 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 COLCA2A8K830 154 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 B4DEV8 164 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 M0R036 132 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ZNF134P52741 427 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PRAMEF5Q5TYX0 476 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ZNF787Q6DD87 383 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 OR8G2PQ6IF36 304 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ZNF709Q8N972 641 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RARRES2Q99969 163 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 GAL3ST2Q9H3Q3 398 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RFNGQ9Y644 331 aa14.64□□□□□ -0.07
HLA-DQB1-204ENST00000399084 A0A087WWC5 75 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TRGV8A0A0C4DH27 118 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 HRASP01112 189 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 IFNA17P01571 189 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 THBDP07204 575 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MDKP21741 143 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ATP5IP56385 69 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TMPRSS3P57727 454 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 BSPH1Q075Z2 132 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 LTC4SQ16873 150 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CT45A1Q5HYN5 189 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SLC35E3Q7Z769 313 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ZNF439Q8NDP4 499 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CT45A3Q8NHU0 189 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RAB39BQ96DA2 213 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RCC1LQ96I51 464 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MS4A5Q9H3V2 200 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ESRP2Q9H6T0 727 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 USF3Q68DE3 2245 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 OR13C7P0DN81 318 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CASP6P55212 293 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MRPS11P82912 194 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SLC39A9Q9NUM3 307 aa14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RPUSD1Q9UJJ7 312 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CELSR3Q9NYQ7 3312 aa14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 UBE2L5PA0A1B0GUS4 154 aa14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CYB5R3P00387 301 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ARG1P05089 322 aa14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SNRNP70P08621 437 aaKnown RBP14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 BCL2P10415 239 aa14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MAS1LP35410 378 aa14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PNRC1Q12796 327 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 HAGHQ16775 308 aa14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SMUG1Q53HV7 270 aa14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 NIPSNAP3BQ9BS92 247 aa14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 VAX2Q9UIW0 290 aa14.62□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MEX3AA1L020 520 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CXorf65A6NEN9 183 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 NDUFA2O43678 99 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RELBQ01201 579 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TMEM249Q2WGJ8 235 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SLC25A48Q6ZT89 311 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 C8orf31Q8N9H6 132 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CCL13Q99616 98 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 GVINP1Q7Z2Y8 2422 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PPIAL4EA0A075B759 164 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CTXND1A0A1B0GTU2 59 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MED19A0JLT2 244 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PPIAL4DF5H284 164 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 OR9G9P0C7N8 305 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PPIAL4FP0DN26 164 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 DAOP14920 347 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 OR2B8PP59922 312 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RAB11AP62491 216 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RPL39P5Q59GN2 51 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RXFP4Q8TDU9 374 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TVP23CQ96ET8 276 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 QTRT1Q9BXR0 403 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ACTR3CQ9C0K3 210 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SAP30LQ9HAJ7 183 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SIRT7Q9NRC8 400 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 KCNIP2Q9NS61 270 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 FOXA2Q9Y261 457 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PPIAL4AQ9Y536 164 aa14.61□□□□□ -0.07
HLA-DQB1-204ENST00000399084 A0A1B0GV50 99 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MAP1LC3B2A6NCE7 125 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 C15orf62A8K5M9 175 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 H3BQ15 152 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CYB5BO43169 146 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 GYPAP02724 150 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 FGF7P21781 194 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 VDAC2P45880 294 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CCL8P80075 99 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TLE1Q04724 770 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 FAM201AQ5SY85 155 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms