RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 AUP1Q9Y679 476 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 ICE1Q9Y2F5 2266 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 PRNTQ86SH4 94 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 ZNF645Q8N7E2 425 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 APCDD1LQ8NCL9 501 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 RBKSQ9H477 322 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 ADAMTS7Q9UKP4 1686 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 PGLYRP1O75594 196 aaPredicted RBP8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 RPL27AP46776 148 aaKnown RBP8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 RND3P61587 244 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 MMDQ15546 238 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 RND1Q92730 232 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 GPR146Q96CH1 333 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 CRISPLD2Q9H0B8 497 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 C5orf66Q9H5L9 145 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 FNDC4Q9H6D8 234 aaPredicted RBP8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 MIA3Q5JRA6 1907 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 IGHV3OR15-7A0A075B7D8 119 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 IGHV4-34P06331 123 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 DANCRP0C864 163 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 SPANXN1Q5VSR9 72 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 OR8G5Q8NG78 346 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 C14orf144Q96I85 54 aa8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 SLC25A10Q9UBX3 287 aaPredicted RBP8.84□□□□□ -0.99
LIMCH1-203ENST00000396595 C7orf71A4D174 169 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 CEACAM18A8MTB9 384 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 LINC00869P0C866 280 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 CIRBPQ14011 172 aaKnown RBP8.83□□□□□ -1
LIMCH1-203ENST00000396595 TTC9CQ8N5M4 171 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 TMEM45BQ96B21 275 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 SOSTQ9BQB4 213 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 ATG2BQ96BY7 2078 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 CCDC88CQ9P219 2028 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 PPIAL4EA0A075B759 164 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 PPIAL4DF5H284 164 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 PRSS2P07478 247 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 PPIAL4FP0DN26 164 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 MC5RP33032 325 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 ZNF324BQ6AW86 544 aaPredicted RBP8.83□□□□□ -1
LIMCH1-203ENST00000396595 SELENOHQ8IZQ5 122 aaKnown RBP8.83□□□□□ -1
LIMCH1-203ENST00000396595 PPIAL4AQ9Y536 164 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 CD8AP01732 235 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 APOBEC4Q8WW27 367 aaKnown RBP8.83□□□□□ -1
LIMCH1-203ENST00000396595 TTTY12Q9BZ98 90 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 LINC00470Q9BZP3 86 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 WBP1LQ9NX94 342 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 OR2H2O95918 312 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 SAXO1Q8IYX7 474 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 LHFPL6Q9Y693 200 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 TMEM189A5PLL7 270 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 MPV17P39210 176 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 TSPAN7P41732 249 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 UCP3P55916 312 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 FGFRL1Q8N441 504 aa8.83□□□□□ -1
LIMCH1-203ENST00000396595 A0A1W2PPE3 182 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 C16orf97H3BN30 126 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 DLEU1O43261 78 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 LINC01590Q5TEZ4 76 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 SMOC1Q9H4F8 434 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 FSCN3Q9NQT6 498 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 IL36RNQ9UBH0 155 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 AGAP20933 346 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 UCP2P55851 309 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 UNC119Q13432 240 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 POC1AQ8NBT0 407 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 DIRC2Q96SL1 478 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 ZNF257Q9Y2Q1 563 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 RAXQ9Y2V3 346 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 TRBV9A0A0B4J1U6 114 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 TMEM14DPA8MWL7 114 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 DLL1O00548 723 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 CDX4O14627 284 aaPredicted RBP8.82□□□□□ -1
LIMCH1-203ENST00000396595 RTP5Q14D33 572 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 Q5BKY6 102 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 TMEM101Q96IK0 257 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 Q96M66 194 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 APC2O95996 2303 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 A6NNC1 897 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 SRIP30626 198 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 NUTF2P61970 127 aaKnown RBP8.82□□□□□ -1
LIMCH1-203ENST00000396595 C19orf54Q5BKX5 351 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 ZNF714Q96N38 554 aa8.82□□□□□ -1
LIMCH1-203ENST00000396595 GLIPR1P48060 266 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 ZNF362Q5T0B9 420 aaPredicted RBP8.81□□□□□ -1
LIMCH1-203ENST00000396595 TPRX1Q8N7U7 411 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 G6PC2Q9NQR9 355 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 DLL3Q9NYJ7 618 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 R4GN57 208 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 J3KRW8 73 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 GDF9O60383 454 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 REG1BP48304 166 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 P2RY6Q15077 328 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 MIC13Q5XKP0 118 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 OR52M1Q8NGK5 317 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 LY75O60449 1722 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 MARF1Q9Y4F3 1742 aaKnown RBP8.81□□□□□ -1
LIMCH1-203ENST00000396595 SMIM10L1P0DMW3 83 aa8.81□□□□□ -1
LIMCH1-203ENST00000396595 SMIM10Q96HG1 83 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms