RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 CREBL2O60519 120 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 CRYZL1O95825 349 aa11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 IGKV1-16P04430 117 aa11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 SERPINE2P07093 398 aa11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 ANXA3P12429 323 aa11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 FBLN7Q53RD9 439 aa11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 C11orf88Q6PI97 169 aa11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 C12orf45Q8N5I9 185 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 RITA1Q96K30 269 aa11.36□□□□□ -0.59
HERPUD1-203ENST00000379792 SVEP1Q4LDE5 3571 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 SNRPGP15A8MWD9 76 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 TXNL1O43396 289 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 SSNA1O43805 119 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 S1PR2O95136 353 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 IGKV1-39P01597 117 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 APOA2P02652 100 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 IGKV1D-39P04432 117 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 UCP1P25874 307 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 TMEM268Q5VZI3 342 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 LIAT1Q6ZQX7 453 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 OR8H3Q8N146 312 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 MITD1Q8WV92 249 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 CFHR4Q92496 578 aa11.35□□□□□ -0.59
HERPUD1-203ENST00000379792 OOSP1A8MZH6 123 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 SRP14P37108 136 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 HNF4GQ14541 408 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 RTL8BQ17RB0 113 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 C2orf68Q2NKX9 166 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 CCDC144NLQ6NUI1 221 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 ZNF695Q8IW36 515 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 SELENOHQ8IZQ5 122 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 VKORC1L1Q8N0U8 176 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 PHB2Q99623 299 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 WASHC3Q9Y3C0 194 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 HIVEP2P31629 2446 aa11.34□□□□□ -0.59
HERPUD1-203ENST00000379792 ADAP1O75689 374 aa11.33□□□□□ -0.59
HERPUD1-203ENST00000379792 VENTXO95231 258 aa11.33□□□□□ -0.59
HERPUD1-203ENST00000379792 CDS2O95674 445 aa11.33□□□□□ -0.59
HERPUD1-203ENST00000379792 LYZL2Q7Z4W2 148 aa11.33□□□□□ -0.59
HERPUD1-203ENST00000379792 CADM3Q8N126 398 aa11.33□□□□□ -0.59
HERPUD1-203ENST00000379792 LGI3Q8N145 548 aa11.33□□□□□ -0.59
HERPUD1-203ENST00000379792 OR4S2Q8NH73 311 aa11.33□□□□□ -0.59
HERPUD1-203ENST00000379792 COQ8AQ8NI60 647 aa11.33□□□□□ -0.59
HERPUD1-203ENST00000379792 CD300LFQ8TDQ1 290 aa11.33□□□□□ -0.59
HERPUD1-203ENST00000379792 CCSO14618 274 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 KRASP01116 189 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 IGKV1D-33P01593 117 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 IGKV1-33P01594 117 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 SNRNP70P08621 437 aaKnown RBP11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 HOXB5P09067 269 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 MC5RP33032 325 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 G6PCP35575 357 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 KIR2DS2P43631 304 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 RPS16P62249 146 aaKnown RBP11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 HES1Q14469 280 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 IZUMO4Q1ZYL8 232 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 SSX9Q7RTT3 188 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 SLC35G3Q8N808 338 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 FLYWCH2Q96CP2 140 aaKnown RBP11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 MED28Q9H204 178 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
HERPUD1-203ENST00000379792 SRRM4A7MD48 611 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.61e-7■■■■■ 34.3
HERPUD1-203ENST00000379792 B3GALNT1O75752 331 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 FBP1P09467 338 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 CD1BP29016 333 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 BPIFB3P59826 476 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 FCN2Q15485 313 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 KRTAP21-3Q3LHN1 58 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 PDPNQ86YL7 162 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 TCTEX1D1Q8N7M0 179 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 RBPMSQ93062 196 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 MEGF9Q9H1U4 602 aa11.32□□□□□ -0.6
HERPUD1-203ENST00000379792 SHOXO15266 292 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 SIX6O95475 246 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 HPRT1P00492 218 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 IGKV1-5P01602 117 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 RRASP10301 218 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 CNTFRP26992 372 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 TAGLNQ01995 201 aaKnown RBP11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 HABP2Q14520 560 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 SSX3Q99909 188 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 PLEKHA2Q9HB19 425 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 FN1P02751 2386 aaKnown RBP11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 A0A0B4J2A0 478 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 A0A0G2JRQ6 117 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 C13orf42A0A1B0GVH6 325 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 MPTX1A8MV57 137 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 GOSR2O14653 212 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 HNF1AP20823 631 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 BRS3P32247 399 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 SRPXP78539 464 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 LRTM2Q8N967 370 aa11.31□□□□□ -0.6
HERPUD1-203ENST00000379792 PIFOQ8TCI5 191 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms