RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 SRSF7Q16629 238 aaKnown RBP eCLIP14.02□□□□□ -0.16
RGP1-201ENST00000378078 FAM89BQ8N5H3 189 aa14.02□□□□□ -0.16
RGP1-201ENST00000378078 IGHV4-39P01824 125 aa14.02□□□□□ -0.16
RGP1-201ENST00000378078 C7orf69Q9H7B7 122 aa14.02□□□□□ -0.16
RGP1-201ENST00000378078 PITX3O75364 302 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 STPG3Q8N7X2 389 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 A0A0U1RRA0 63 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 ZG16O60844 167 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 VDAC2P45880 294 aaPredicted RBP14.02□□□□□ -0.17
RGP1-201ENST00000378078 NRN1LQ496H8 165 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 FAM71F2Q6NXP2 309 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 IFT22Q9H7X7 185 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 PAPPAQ13219 1627 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 TRAV8-6A0A0B4J262 113 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 CRYBB3P26998 211 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 CFAP161Q6P656 301 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 MSRB3Q8IXL7 192 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 SH3BGRL3Q9H299 93 aa14.02□□□□□ -0.17
RGP1-201ENST00000378078 RPL34P49207 117 aaKnown RBP14.01□□□□□ -0.17
RGP1-201ENST00000378078 UNC119Q13432 240 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 GALNT14Q96FL9 552 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 ST6GALNAC2Q9UJ37 374 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 ELF5Q9UKW6 265 aaPredicted RBP14.01□□□□□ -0.17
RGP1-201ENST00000378078 GPR183P32249 361 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 SLIRPQ9GZT3 109 aaKnown RBP14.01□□□□□ -0.17
RGP1-201ENST00000378078 MRPL18Q9H0U6 180 aaKnown RBP14.01□□□□□ -0.17
RGP1-201ENST00000378078 SNRNP200O75643 2136 aaKnown RBP14.01□□□□□ -0.17
RGP1-201ENST00000378078 AKAP11Q9UKA4 1901 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 CRYBA2P53672 197 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 ZP4Q12836 540 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 ZNF506Q5JVG8 444 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 DEGS2Q6QHC5 323 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 LINC00305Q7Z4B0 112 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 TMEM74BQ9NUR3 256 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 TRAV21A0A0B4J279 112 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 TRBV7-9A0A0J9YWB2 115 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 SOD3P08294 240 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 HKR1P10072 659 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 EPOPA6NHQ4 379 aa14.01□□□□□ -0.17
RGP1-201ENST00000378078 KLF14Q8TD94 323 aaPredicted RBP14.01□□□□□ -0.17
RGP1-201ENST00000378078 TGIF2-C20orf24A0A0A6YYL0 155 aa14□□□□□ -0.17
RGP1-201ENST00000378078 FXYD7P58549 80 aa14□□□□□ -0.17
RGP1-201ENST00000378078 MESP2Q0VG99 397 aa14□□□□□ -0.17
RGP1-201ENST00000378078 LINC00596Q86U02 117 aa14□□□□□ -0.17
RGP1-201ENST00000378078 A0A1W2PQD3 144 aa14□□□□□ -0.17
RGP1-201ENST00000378078 COLCA1Q6ZS62 124 aa14□□□□□ -0.17
RGP1-201ENST00000378078 KIAA0040Q15053 153 aa14□□□□□ -0.17
RGP1-201ENST00000378078 TMEM136Q6ZRR5 245 aa14□□□□□ -0.17
RGP1-201ENST00000378078 IGHV3-73A0A0B4J1V6 119 aa14□□□□□ -0.17
RGP1-201ENST00000378078 CTXND1A0A1B0GTU2 59 aa14□□□□□ -0.17
RGP1-201ENST00000378078 FABP2P12104 132 aa14□□□□□ -0.17
RGP1-201ENST00000378078 CHST5Q9GZS9 411 aa14□□□□□ -0.17
RGP1-201ENST00000378078 PLSCR2Q9NRY7 297 aa14□□□□□ -0.17
RGP1-201ENST00000378078 A0A1W2PPV9 198 aa14□□□□□ -0.17
RGP1-201ENST00000378078 C7orf77A4D0Y5 90 aa14□□□□□ -0.17
RGP1-201ENST00000378078 GRIFINA4D1Z8 144 aa14□□□□□ -0.17
RGP1-201ENST00000378078 EGR1P18146 543 aa14□□□□□ -0.17
RGP1-201ENST00000378078 NPBWR2P48146 333 aa14□□□□□ -0.17
RGP1-201ENST00000378078 ST6GALNAC6Q969X2 333 aa14□□□□□ -0.17
RGP1-201ENST00000378078 TMEM70Q9BUB7 260 aa14□□□□□ -0.17
RGP1-201ENST00000378078 ZFC3H1O60293 1989 aaKnown RBP14□□□□□ -0.17
RGP1-201ENST00000378078 OR51M1Q9H341 326 aa14□□□□□ -0.17
RGP1-201ENST00000378078 CXorf51AA0A1B0GTR3 108 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 TCRBV4S1A1TA0A5B7 111 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 C1QL1O75973 258 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 TFF1P04155 84 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 CRHP06850 196 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 C2orf88Q9BSF0 95 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 ALKBH7Q9BT30 221 aaPredicted RBP13.99□□□□□ -0.17
RGP1-201ENST00000378078 C10orf128Q5T292 105 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 CLEC7AQ9BXN2 247 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 FBXL15Q9H469 300 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 BSPH1Q075Z2 132 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 C17orf51A8MQB3 221 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 AHRRA9YTQ3 701 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 TSPOP30536 169 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 WDR82Q6UXN9 313 aa13.99□□□□□ -0.17
RGP1-201ENST00000378078 ZNF430Q9H8G1 570 aaPredicted RBP13.99□□□□□ -0.17
RGP1-201ENST00000378078 LIPFP07098 398 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 CHRNA10Q9GZZ6 450 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 KIAA0100Q14667 2235 aaKnown RBP13.98□□□□□ -0.17
RGP1-201ENST00000378078 A8MWL6 223 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 FOXS1O43638 330 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 ICAM4Q14773 271 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 DMKNQ6E0U4 476 aaPredicted RBP13.98□□□□□ -0.17
RGP1-201ENST00000378078 LINC00527Q9UJ94 153 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 CKAP5Q14008 2032 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 IGLV3-16A0A075B6K0 115 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 NUTF2P61970 127 aaKnown RBP13.98□□□□□ -0.17
RGP1-201ENST00000378078 KIR3DL3Q8N743 410 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 TMEM174Q8WUU8 243 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 LRRC3BQ96PB8 259 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 KIR2DL4Q99706 377 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 OR4X2Q8NGF9 303 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 ZNF501Q96CX3 271 aaPredicted RBP13.98□□□□□ -0.17
RGP1-201ENST00000378078 GP6Q9HCN6 339 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 NRXN3Q9Y4C0 1643 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 A0A1W2PQF6 199 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 NPIPB11E5RHQ5 1161 aa13.98□□□□□ -0.17
RGP1-201ENST00000378078 MC5RP33032 325 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms