RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ZNF488Q96MN9 340 aa10.58□□□□□ -0.72
NPLOC4-202ENST00000374747 CEACAM18A8MTB9 384 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 SOD3P08294 240 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 HTN1P15515 57 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 BTF3P20290 206 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 MMDQ15546 238 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 IZUMO4Q1ZYL8 232 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 FBXW9Q5XUX1 488 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 PQLC2Q6ZP29 291 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 HIST1H2BAQ96A08 127 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 MIEN1Q9BRT3 115 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 MDC1Q14676 2089 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 TIAF1O95411 115 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 AGAP20933 346 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 MAS1LP35410 378 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 CXorf66Q5JRM2 361 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 RND1Q92730 232 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 WIPI2Q9Y4P8 454 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 ALPK3Q96L96 1907 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 IGKV3-7A0A075B6H7 116 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 CLDN14O95500 239 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 ISG15P05161 165 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 DNLZQ5SXM8 178 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 LEMD1Q68G75 181 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 RBKSQ9H477 322 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 IGHV3OR15-7A0A075B7D8 119 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 A0A1W2PP11 408 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 ZNF324O75467 553 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 LINC00869P0C866 280 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 FOLR2P14207 255 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 CKS2P33552 79 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 ADIPOQQ15848 244 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 LSM10Q969L4 123 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 RARRES2Q99969 163 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 CBLN4Q9NTU7 201 aa10.57□□□□□ -0.72
NPLOC4-202ENST00000374747 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 PRDX2P32119 198 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 ZNF658BQ4V348 819 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 MDP1Q86V88 176 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 MARS2Q96GW9 593 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 TRBV5-7A0A0A0MS05 114 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 TRBV23-1A0A0A0MS06 115 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 E9PQ18 207 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 K7N7A8 449 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 APCDD1LQ8NCL9 501 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 AICDAQ9GZX7 198 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 CELSR3Q9NYQ7 3312 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 IGKV3D-11A0A0A0MRZ8 115 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 A0A1W2PPE3 182 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A10PA6NDY2 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A18PA6NE21 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A16PA6NEW6 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A20PA6NIJ5 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A8PA6NJQ4 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A7PA6NKC0 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A22PA8MWA6 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A12PA8MX19 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A5PA8MXJ8 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A23PA8MXZ1 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A26D6RGX4 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 OR2A4O95047 310 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A15PP0C7V4 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A13PP0C7W8 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A14PP0C7W9 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 FAM90A24PP0C7X0 464 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 DANCRP0C864 163 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 PCP4P48539 62 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 SMAGPQ0VAQ4 97 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 ZNF645Q8N7E2 425 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 OR2A7Q96R45 310 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 METTL1Q9UBP6 276 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 HSPB7Q9UBY9 170 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 SCTP09683 121 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 RPS11P62280 158 aaKnown RBP eCLIP10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 RTP5Q14D33 572 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 MS4A5Q9H3V2 200 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 RABAC1Q9UI14 185 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 MED12Q93074 2177 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 PQLC2LA1A4F0 135 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 SCGB1A1P11684 91 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 ID1P41134 155 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 REC114Q7Z4M0 266 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 TMEM105Q8N8V8 129 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 TMEM70Q9BUB7 260 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 GGACTQ9BVM4 153 aa10.56□□□□□ -0.72
NPLOC4-202ENST00000374747 ABCA7Q8IZY2 2146 aa10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 MGST3O14880 152 aa10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 NKX2-8O15522 239 aa10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 UPK3AO75631 287 aa10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 GLIPR1P48060 266 aa10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 REG1BP48304 166 aa10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 RPL31P62899 125 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 HLA-DRB1P01911 266 aa10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 QTRT1Q9BXR0 403 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 SLC25A10Q9UBX3 287 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 PGLYRP1O75594 196 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 SRIP30626 198 aa10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 RPL27AP46776 148 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-202ENST00000374747 PSG4Q00888 419 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms