RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 QTRT1Q9BXR0 403 aaKnown RBP14.82□□□□□ -0.04
PTPRU-202ENST00000373779 SDF2L1Q9HCN8 221 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 TEX50A0A1B0GTY4 177 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 OR2D3Q8NGH3 330 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 CDX2Q99626 313 aaPredicted RBP14.82□□□□□ -0.04
PTPRU-202ENST00000373779 SLX1AQ9BQ83 275 aa14.82□□□□□ -0.04
PTPRU-202ENST00000373779 IGKV1D-13A0A0B4J2D9 117 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 ODAMA1E959 279 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 IGKV1-13P0DP09 117 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 RTN4RL2Q86UN3 420 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 FAM131CQ96AQ9 280 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 OR2V2Q96R30 315 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 PAXXQ9BUH6 204 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 TRGV8A0A0C4DH27 118 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 RHBDL1O75783 438 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 COX7A1P24310 79 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 TGIF2LYQ8IUE0 185 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 TGIF2LXQ8IUE1 241 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 ZNF525Q8N782 197 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 NPCDR1Q9BY65 106 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 PROB1E7EW31 1015 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 OR5AL1P0C617 328 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 NHLRC2Q8NBF2 726 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 SFRP2Q96HF1 295 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 A0A1B0GV90 55 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 CSN3P07498 182 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 PTGDSP41222 190 aa14.81□□□□□ -0.04
PTPRU-202ENST00000373779 IBA57Q5T440 356 aaKnown RBP14.81□□□□□ -0.04
PTPRU-202ENST00000373779 NEURL1O76050 574 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 COL8A1P27658 744 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 MFAP2P55001 183 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 WFIKKN1Q96NZ8 548 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 J3QW42 95 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 SLC35E4Q6ICL7 350 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 ZDHHC8Q9ULC8 765 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 AMMECR1Q9Y4X0 333 aaPredicted RBP14.8□□□□□ -0.04
PTPRU-202ENST00000373779 MDC1Q14676 2089 aaKnown RBP14.8□□□□□ -0.04
PTPRU-202ENST00000373779 NCBP2LA6PVI3 153 aaKnown RBP14.8□□□□□ -0.04
PTPRU-202ENST00000373779 CFHR1Q03591 330 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 ZNF703Q9H7S9 590 aaPredicted RBP14.8□□□□□ -0.04
PTPRU-202ENST00000373779 SAP30LQ9HAJ7 183 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 JPT1Q9UK76 154 aa14.8□□□□□ -0.04
PTPRU-202ENST00000373779 TMEM265A0A087WTH1 108 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 KLK10O43240 276 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 CCL20P78556 96 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 COL5A1-AS1Q5SY13 56 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 RNF144BQ7Z419 303 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 ELOVL1Q9BW60 279 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 ZNF729A6NN14 1252 aaPredicted RBP14.79□□□□□ -0.04
PTPRU-202ENST00000373779 EGR1P18146 543 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 ZDHHC16Q969W1 377 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 C5orf52A6NGY3 159 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 ZNF785A8K8V0 405 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 RTP5Q14D33 572 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 PQLC2Q6ZP29 291 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 MAP1LC3CQ9BXW4 147 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 ANAPC1Q9H1A4 1944 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 SSTR5P35346 364 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 ASCL3Q9NQ33 180 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 CALYQ9NYX4 217 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 CD99P14209 185 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 ABLIM2Q6H8Q1 611 aa14.79□□□□□ -0.04
PTPRU-202ENST00000373779 UMODP07911 640 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 HSPE1P61604 102 aaKnown RBP14.78□□□□□ -0.04
PTPRU-202ENST00000373779 OR4B1Q8NGF8 309 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 TCF19Q9Y242 345 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 CELA3AP09093 270 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 CRYGSP22914 178 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 REG1BP48304 166 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 HEPN1Q6WQI6 88 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 SPSB4Q96A44 273 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 OPN3Q9H1Y3 402 aaPredicted RBP14.78□□□□□ -0.04
PTPRU-202ENST00000373779 RP1P56715 2156 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 HLA-DQA1P01909 254 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 ADCYAP1P18509 176 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 ID3Q02535 119 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 TFF3Q07654 80 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 ABHD12Q8N2K0 398 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 C12orf77C9JDV5 145 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 CCL13Q99616 98 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 PNRC2Q9NPJ4 139 aaKnown RBP14.78□□□□□ -0.04
PTPRU-202ENST00000373779 CBLN4Q9NTU7 201 aa14.78□□□□□ -0.04
PTPRU-202ENST00000373779 COL4A6Q14031 1691 aa14.77□□□□□ -0.04
PTPRU-202ENST00000373779 P2RY6Q15077 328 aa14.77□□□□□ -0.04
PTPRU-202ENST00000373779 SLC25A10Q9UBX3 287 aaPredicted RBP14.77□□□□□ -0.04
PTPRU-202ENST00000373779 LOC102723996A0A087X1L8 192 aa14.77□□□□□ -0.04
PTPRU-202ENST00000373779 ACP1P24666 158 aa14.77□□□□□ -0.04
PTPRU-202ENST00000373779 CD82P27701 267 aa14.77□□□□□ -0.04
PTPRU-202ENST00000373779 RPL31P62899 125 aaKnown RBP14.77□□□□□ -0.04
PTPRU-202ENST00000373779 LCN2P80188 198 aa14.77□□□□□ -0.04
PTPRU-202ENST00000373779 VKORC1L1Q8N0U8 176 aa14.77□□□□□ -0.04
PTPRU-202ENST00000373779 GRIFINA4D1Z8 144 aa14.77□□□□□ -0.05
PTPRU-202ENST00000373779 CEACAM18A8MTB9 384 aa14.77□□□□□ -0.05
PTPRU-202ENST00000373779 LYL1P12980 280 aa14.77□□□□□ -0.05
PTPRU-202ENST00000373779 NABP1Q96AH0 204 aa14.77□□□□□ -0.05
PTPRU-202ENST00000373779 IGKV1-12A0A0C4DH73 117 aa14.77□□□□□ -0.05
PTPRU-202ENST00000373779 IGKV1D-12P01611 117 aa14.77□□□□□ -0.05
PTPRU-202ENST00000373779 RIGQ13278 110 aa14.77□□□□□ -0.05
PTPRU-202ENST00000373779 LINC00869P0C866 280 aa14.76□□□□□ -0.05
PTPRU-202ENST00000373779 SPATA45Q537H7 98 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms