RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 C17orf112F2Z3M2 114 aa18.47■□□□□ 0.55
NKX2-1-201ENST00000354822 RAB7AP51149 207 aa18.47■□□□□ 0.55
NKX2-1-201ENST00000354822 EDDM3BP56851 147 aa18.47■□□□□ 0.55
NKX2-1-201ENST00000354822 LINC00205P59089 165 aa18.47■□□□□ 0.55
NKX2-1-201ENST00000354822 OR52E5Q8NH55 327 aa18.47■□□□□ 0.55
NKX2-1-201ENST00000354822 FAM57AQ8TBR7 257 aa18.47■□□□□ 0.55
NKX2-1-201ENST00000354822 FAM222BQ8WU58 562 aa18.47■□□□□ 0.55
NKX2-1-201ENST00000354822 NDUFS6O75380 124 aaKnown RBP18.46■□□□□ 0.55
NKX2-1-201ENST00000354822 SPCS3P61009 180 aa18.46■□□□□ 0.55
NKX2-1-201ENST00000354822 C12orf57Q99622 126 aa18.46■□□□□ 0.55
NKX2-1-201ENST00000354822 TMEM242Q9NWH2 141 aa18.46■□□□□ 0.55
NKX2-1-201ENST00000354822 CALYQ9NYX4 217 aa18.46■□□□□ 0.55
NKX2-1-201ENST00000354822 RNF7Q9UBF6 113 aa18.46■□□□□ 0.55
NKX2-1-201ENST00000354822 METTL1Q9UBP6 276 aaKnown RBP18.46■□□□□ 0.55
NKX2-1-201ENST00000354822 IL19Q9UHD0 177 aa18.46■□□□□ 0.55
NKX2-1-201ENST00000354822 ZNF727A8MUV8 499 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 K7EM74 188 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 M0R1X1 148 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 CGB3P0DN86 165 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 CGB7P0DN87 165 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 ERVK-16P61578 105 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 ACSM6Q6P461 480 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 OR4A16Q8NH70 328 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 QTRT1Q9BXR0 403 aaKnown RBP18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 ACTR3CQ9C0K3 210 aaPredicted RBP18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 A8MXE2 369 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 SOX15O60248 233 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 MDKP21741 143 aaPredicted RBP18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 SPRNQ5BIV9 151 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 OR10G9Q8NGN4 311 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 OR10G7Q8NGN6 311 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 S1PR3Q99500 378 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 NPCDR1Q9BY65 106 aa18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 DIDO1Q9BTC0 2240 aaKnown RBP18.45■□□□□ 0.54
NKX2-1-201ENST00000354822 IGKV1D-33P01593 117 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 IGKV1-33P01594 117 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 S100A8P05109 93 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 OR9G9P0C7N8 305 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 NQO2P16083 231 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 MEOX2P50222 304 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 ELOBQ15370 118 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 PRAMEF5Q5TYX0 476 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 FAM180AQ6UWF9 173 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 SDSLQ96GA7 329 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 ZNF251Q9BRH9 671 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 IFI27L2Q9H2X8 130 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 TNFSF4P23510 183 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 PDLIM3Q53GG5 364 aaPredicted RBP18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 FFAR4Q5NUL3 377 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 SVILO95425 2214 aa18.44■□□□□ 0.54
NKX2-1-201ENST00000354822 ZNF134P52741 427 aa18.43■□□□□ 0.54
NKX2-1-201ENST00000354822 OR2B8PP59922 312 aa18.43■□□□□ 0.54
NKX2-1-201ENST00000354822 TNFAIP6P98066 277 aaPredicted RBP18.43■□□□□ 0.54
NKX2-1-201ENST00000354822 SDF2L1Q9HCN8 221 aa18.43■□□□□ 0.54
NKX2-1-201ENST00000354822 C15orf62A8K5M9 175 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 CYB5BO43169 146 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 IGHV2-5P01817 119 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 PSMB3P49720 205 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 GCM1Q9NP62 436 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 KBTBD11-OT1A0A1B0GTJ5 212 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 MKRN2OSH3BPM6 223 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 EIF3GO75821 320 aaKnown RBP eCLIP18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 RPS10P46783 165 aaKnown RBP18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 MEF2BQ02080 365 aaPredicted RBP18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 C17orf58Q2M2W7 97 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 PLPPR2Q96GM1 343 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 GGACTQ9BVM4 153 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 FAM234AQ9H0X4 552 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 MANBALQ9NQG1 85 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 GFOD1Q9NXC2 390 aa18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 RIF1Q5UIP0 2472 aaKnown RBP18.42■□□□□ 0.54
NKX2-1-201ENST00000354822 TRGV10A0A0A0MS01 117 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 CYB5R3P00387 301 aaPredicted RBP18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 CD40P25942 277 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 FAM27E3Q08E93 113 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 RPL39P5Q59GN2 51 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 SPINK9Q5DT21 86 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 DMXL1Q9Y485 3027 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 A0A1W2PPE3 182 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 AP4M1O00189 453 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 CD1BP29016 333 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 TFF3Q07654 80 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 ACOT6Q3I5F7 207 aaPredicted RBP18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 NUP37Q8NFH4 326 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 OR4S2Q8NH73 311 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 Q8TCH9 128 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 Q8WTZ3 238 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 TCEAL7Q9BRU2 100 aa18.41■□□□□ 0.54
NKX2-1-201ENST00000354822 TMEM250H0YL14 139 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 MPDU1O75352 247 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 IGHV1-46P01743 117 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 FABP9Q0Z7S8 132 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 STUMQ69YW2 141 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 DDB2Q92466 427 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 WDR83OSQ9Y284 106 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 ZFHX2Q9C0A1 2572 aaPredicted RBP18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 CLDN34H7C241 214 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 TMEM30BQ3MIR4 351 aa18.4■□□□□ 0.54
NKX2-1-201ENST00000354822 WDR25Q64LD2 544 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms