RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 AKR1C8PQ5T2L2 129 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 SLC25A24Q6NUK1 477 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 TCF23Q7RTU1 214 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 MS4A5Q9H3V2 200 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 TMEM106BQ9NUM4 274 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 FASNP49327 2511 aaKnown RBP15.37■□□□□ 0.05
HOXA9-201ENST00000343483 PPIAL4EA0A075B759 164 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 PPIAL4DF5H284 164 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 PPIAL4FP0DN26 164 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 CTRB1P17538 263 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 RPL39P5Q59GN2 51 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 CTRB2Q6GPI1 263 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 TCTEX1D1Q8N7M0 179 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 IFI27L2Q9H2X8 130 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 KCNJ16Q9NPI9 418 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 PPIAL4AQ9Y536 164 aa15.37■□□□□ 0.05
HOXA9-201ENST00000343483 M0R1X1 148 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 SLC31A2O15432 143 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 TAS2R30P59541 319 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 NCR3LG1Q68D85 454 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 GFOD1Q9NXC2 390 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 CISD1Q9NZ45 108 aaKnown RBP15.36■□□□□ 0.05
HOXA9-201ENST00000343483 SLC25A10Q9UBX3 287 aaPredicted RBP15.36■□□□□ 0.05
HOXA9-201ENST00000343483 RAI1Q7Z5J4 1906 aaPredicted RBP15.36■□□□□ 0.05
HOXA9-201ENST00000343483 A0A1B0GW64 132 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 A0A1W2PPE3 182 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 PROP1O75360 226 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 METTL15P1P0C7V9 234 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 DUTP33316 252 aaKnown RBP15.36■□□□□ 0.05
HOXA9-201ENST00000343483 CCL20P78556 96 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 SPSB3Q6PJ21 355 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 THNSL2Q86YJ6 484 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 FAM216AQ8WUB2 273 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 SLC35B3Q9H1N7 401 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 COA4Q9NYJ1 87 aa15.36■□□□□ 0.05
HOXA9-201ENST00000343483 B9A039 149 aa15.35■□□□□ 0.05
HOXA9-201ENST00000343483 FLI1Q01543 452 aaPredicted RBP15.35■□□□□ 0.05
HOXA9-201ENST00000343483 EFNB3Q15768 340 aa15.35■□□□□ 0.05
HOXA9-201ENST00000343483 BTBD17A6NE02 478 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 SIAH2O43255 324 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 FCGR3BO75015 233 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 ETV3LQ6ZN32 361 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 H2BFWTQ7Z2G1 175 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 RARRES2Q99969 163 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 MLXQ9UH92 298 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 TENM4Q6N022 2769 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 GCN1Q92616 2671 aaKnown RBP15.34■□□□□ 0.05
HOXA9-201ENST00000343483 PKDREJQ9NTG1 2253 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 hADV38S2A0JD32 116 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 ZNF729A6NN14 1252 aaPredicted RBP15.34■□□□□ 0.05
HOXA9-201ENST00000343483 FAM90A26D6RGX4 464 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 P0C879 139 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 RAB7AP51149 207 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 UBE2KP61086 200 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 ARL16Q0P5N6 197 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 CT45A1Q5HYN5 189 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 CT45A3Q8NHU0 189 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 SCGB1C1Q8TD33 95 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 CD300LFQ8TDQ1 290 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 RPS10P5Q9NQ39 176 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 SMCO4Q9NRQ5 59 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 IDI2-AS1Q9NZ38 188 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 LAMP3Q9UQV4 416 aa15.34■□□□□ 0.05
HOXA9-201ENST00000343483 HELZ2Q9BYK8 2649 aaKnown RBP15.33■□□□□ 0.05
HOXA9-201ENST00000343483 RBFOX3A6NFN3 312 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 MARCH11A6NNE9 402 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 RBMXL2O75526 392 aaKnown RBP15.33■□□□□ 0.04
HOXA9-201ENST00000343483 OR13C7P0DN81 318 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 AKR1C3P42330 323 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 GNG10P50151 68 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 HBG1P69891 147 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 HBG2P69892 147 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 TLE4Q04727 773 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 TNFRSF9Q07011 255 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 AWAT1Q58HT5 328 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 SPANXN5Q5MJ07 72 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 PRAMEF5Q5TYX0 476 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 DPPA3Q6W0C5 159 aa15.33■□□□□ 0.04
HOXA9-201ENST00000343483 M0R036 132 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 MMP23AO75900 390 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 RPL31P62899 125 aaKnown RBP15.32■□□□□ 0.04
HOXA9-201ENST00000343483 HAPLN4Q86UW8 402 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 MUC15Q8N387 334 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 LILRB2Q8N423 598 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 ZNF525Q8N782 197 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 SFT2D1Q8WV19 159 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 CORO2AQ92828 525 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 AIFM2Q9BRQ8 373 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 RBKSQ9H477 322 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 SMDT1Q9H4I9 107 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.32■□□□□ 0.04
HOXA9-201ENST00000343483 KIAA1456Q9P272 454 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 IGHV1-69-2A0A0G2JMI3 117 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 SNRNP70P08621 437 aaKnown RBP15.32■□□□□ 0.04
HOXA9-201ENST00000343483 RXFP4Q8TDU9 374 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 R3HDM4Q96D70 268 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 HSPB7Q9UBY9 170 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 LINC00312Q9Y6C7 94 aa15.32■□□□□ 0.04
HOXA9-201ENST00000343483 SAA2-SAA4A0A096LPE2 208 aa15.31■□□□□ 0.04
HOXA9-201ENST00000343483 ITGB1BP1O14713 200 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms