RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 RNF222A6NCQ9 220 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 S1PR2O95136 353 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 REPIN1Q9BWE0 567 aaKnown RBP14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 TCF19Q9Y242 345 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 TMEM250H0YL14 139 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 GLIPR1P48060 266 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 FHITP49789 147 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 ATP5IP56385 69 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 SCNM1Q9BWG6 230 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 C1QTNF5Q9BXJ0 243 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 IGLV3-32A0A0A0MS00 114 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 IZUMO4Q1ZYL8 232 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 CALHM1Q8IU99 346 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 IDI2-AS1Q9NZ38 188 aa14.59□□□□□ -0.07
TRAPPC11-201ENST00000334690 BMPR1BO00238 502 aa14.58□□□□□ -0.07
TRAPPC11-201ENST00000334690 RPL30P62888 115 aaKnown RBP14.58□□□□□ -0.07
TRAPPC11-201ENST00000334690 MAP1LC3CQ9BXW4 147 aa14.58□□□□□ -0.07
TRAPPC11-201ENST00000334690 CARHSP1Q9Y2V2 147 aaKnown RBP14.58□□□□□ -0.07
TRAPPC11-201ENST00000334690 PRR32B1ATL7 298 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 CCL21O00585 134 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 COMPP49747 757 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 RTBDNQ9BSG5 229 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 LOC102723996A0A087X1L8 192 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 DLL1O00548 723 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 PRSS1P07477 247 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 MDKP21741 143 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 RARRES2Q99969 163 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 RPRMQ9NS64 109 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 MRPS18CQ9Y3D5 142 aaKnown RBP14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 F5H697 171 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 ORM1P02763 201 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 OR5R1Q8NH85 324 aa14.58□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZNF430Q9H8G1 570 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 IL36RNQ9UBH0 155 aa14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZNF646O15015 1829 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 LBHQ53QV2 105 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZNF788Q6ZQV5 615 aa14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 SNRNP40Q96DI7 357 aaKnown RBP14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 MDC1Q14676 2089 aaKnown RBP14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZNF729A6NN14 1252 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 KBTBD11O94819 623 aa14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 PCGF1Q9BSM1 259 aa14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 C19orf24Q9BVV8 132 aa14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 NAGKQ9UJ70 344 aa14.57□□□□□ -0.08
TRAPPC11-201ENST00000334690 APELAP0DMC3 54 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 EIF4E3Q8N5X7 224 aaKnown RBP14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 HIST1H2BAQ96A08 127 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 SIGLEC12Q96PQ1 595 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 RLFQ13129 1914 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 GPR6P46095 362 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 SIP14410 1827 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 TRAV14DV4A0A0A6YYC5 116 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 IBA57Q5T440 356 aaKnown RBP14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 HSPB8Q9UJY1 196 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 INTS1Q8N201 2190 aaKnown RBP14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZNF716A6NP11 495 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 TCAPO15273 167 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 HLA-DQA1P01909 254 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 C8orf88P0DMB2 117 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 CCL1P22362 96 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 TMEM97Q5BJF2 176 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 SLC25A28Q96A46 364 aa14.56□□□□□ -0.08
TRAPPC11-201ENST00000334690 LNP1A1A4G5 178 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 GLRXP35754 106 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZNF506Q5JVG8 444 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 RTN4RQ9BZR6 473 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 FOXJ2Q9P0K8 574 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 UFC1Q9Y3C8 167 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 SHISA5Q8N114 240 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 DNASE2O00115 360 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 GBGT1Q8N5D6 347 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 VN1R17PQ8TDU5 208 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 SPSB4Q96A44 273 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 PAM16Q9Y3D7 125 aa14.55□□□□□ -0.08
TRAPPC11-201ENST00000334690 ACAA1P09110 424 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 AGAP20933 346 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 FAM89BQ8N5H3 189 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 TMEM116Q8NCL8 245 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZNF837Q96EG3 531 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 RCC1LQ96I51 464 aaKnown RBP14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 TBX15Q96SF7 602 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 MPZP25189 248 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 RSPO4Q2I0M5 234 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 OR4C13Q8NGP0 309 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 PARLQ9H300 379 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 DNAJC4Q9NNZ3 241 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 TNFRSF19Q9NS68 423 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 CLEC5AQ9NY25 188 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 GPR179Q6PRD1 2367 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 CELA3AP09093 270 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 SSTR5P35346 364 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 RND2P52198 227 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZNF343Q6P1L6 599 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 ZMAT5Q9UDW3 170 aaKnown RBP14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 C12orf77C9JDV5 145 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 DIRC3C9JPN6 131 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 GCGP01275 180 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 UMODP07911 640 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 ATP1A1-AS1Q5TC04 95 aa14.54□□□□□ -0.08
TRAPPC11-201ENST00000334690 OR1P1Q8NH06 330 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms