RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SRRM4A7MD48 611 aaKnown RBP13.68□□□□□ -0.22
HDDC3-201ENST00000330334 CNIH1O95406 144 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 DUTP33316 252 aaKnown RBP13.68□□□□□ -0.22
HDDC3-201ENST00000330334 SCAND1P57086 179 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 TPPP2P59282 170 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 TEX45Q8NA69 505 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 POC5Q8NA72 575 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 BVESQ8NE79 360 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 GRPEL2Q8TAA5 225 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 HARBI1Q96MB7 349 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 WWC2-AS2Q96NR7 200 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 MS4A10Q96PG2 267 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 SSR3Q9UNL2 185 aa13.68□□□□□ -0.22
HDDC3-201ENST00000330334 IGKV1D-8A0A087WSZ0 117 aa13.67□□□□□ -0.22
HDDC3-201ENST00000330334 SHOXO15266 292 aa13.67□□□□□ -0.22
HDDC3-201ENST00000330334 SLC22A5O76082 557 aa13.67□□□□□ -0.22
HDDC3-201ENST00000330334 TRGV3P03979 118 aa13.67□□□□□ -0.22
HDDC3-201ENST00000330334 SLURP1P55000 103 aa13.67□□□□□ -0.22
HDDC3-201ENST00000330334 UBE2KP61086 200 aa13.67□□□□□ -0.22
HDDC3-201ENST00000330334 PJVKQ0ZLH3 352 aa13.67□□□□□ -0.22
HDDC3-201ENST00000330334 ZNF773Q6PK81 442 aa13.67□□□□□ -0.22
HDDC3-201ENST00000330334 RANGRFQ9HD47 186 aaPredicted RBP13.67□□□□□ -0.22
HDDC3-201ENST00000330334 ELF5Q9UKW6 265 aaPredicted RBP13.67□□□□□ -0.22
HDDC3-201ENST00000330334 SAP30O75446 220 aa13.66□□□□□ -0.22
HDDC3-201ENST00000330334 IGHV3-11P01762 117 aa13.66□□□□□ -0.22
HDDC3-201ENST00000330334 MRGPRG-AS1Q2M3A8 158 aa13.66□□□□□ -0.22
HDDC3-201ENST00000330334 SFXN4Q6P4A7 337 aa13.66□□□□□ -0.22
HDDC3-201ENST00000330334 OSR1Q8TAX0 266 aaPredicted RBP13.66□□□□□ -0.22
HDDC3-201ENST00000330334 ST6GALNAC5Q9BVH7 336 aa13.66□□□□□ -0.22
HDDC3-201ENST00000330334 DAPK2Q9UIK4 370 aa13.66□□□□□ -0.22
HDDC3-201ENST00000330334 OR2W1Q9Y3N9 320 aa13.66□□□□□ -0.22
HDDC3-201ENST00000330334 SMAD5-AS1Q9Y6J3 95 aa13.66□□□□□ -0.22
HDDC3-201ENST00000330334 NBEAL2Q6ZNJ1 2754 aa13.66□□□□□ -0.22
HDDC3-201ENST00000330334 C13orf42A0A1B0GVH6 325 aa13.65□□□□□ -0.22
HDDC3-201ENST00000330334 HLA-DQB1P01920 261 aa13.65□□□□□ -0.22
HDDC3-201ENST00000330334 ZP3P21754 424 aa13.65□□□□□ -0.22
HDDC3-201ENST00000330334 VMA21Q3ZAQ7 101 aa13.65□□□□□ -0.22
HDDC3-201ENST00000330334 CNIH2Q6PI25 160 aa13.65□□□□□ -0.22
HDDC3-201ENST00000330334 ZNF645Q8N7E2 425 aa13.65□□□□□ -0.22
HDDC3-201ENST00000330334 OR5T1Q8NG75 326 aa13.65□□□□□ -0.22
HDDC3-201ENST00000330334 OR6Q1Q8NGQ2 317 aa13.65□□□□□ -0.22
HDDC3-201ENST00000330334 ZNF355PQ9NSJ1 428 aa13.65□□□□□ -0.22
HDDC3-201ENST00000330334 RRP15Q9Y3B9 282 aaKnown RBP13.65□□□□□ -0.22
HDDC3-201ENST00000330334 STAB2Q8WWQ8 2551 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 SMIM30A4D0T7 59 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 LINC00473A8K010 186 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 TMEM127O75204 238 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 AADACP22760 399 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 SDC2P34741 201 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 PRSS8Q16651 343 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 USMG5Q96IX5 58 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 OR4C12Q96R67 309 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 ELOVL1Q9BW60 279 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 TINAGL1Q9GZM7 467 aaPredicted RBP13.64□□□□□ -0.23
HDDC3-201ENST00000330334 OR51E2Q9H255 320 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 U3KQK5 164 aa13.64□□□□□ -0.23
HDDC3-201ENST00000330334 KMT2CQ8NEZ4 4911 aaKnown RBP13.63□□□□□ -0.23
HDDC3-201ENST00000330334 TMEM235A6NFC5 223 aa13.63□□□□□ -0.23
HDDC3-201ENST00000330334 LY86O95711 162 aa13.63□□□□□ -0.23
HDDC3-201ENST00000330334 CRYZL1O95825 349 aa13.63□□□□□ -0.23
HDDC3-201ENST00000330334 OVCH2Q7RTZ1 564 aa13.63□□□□□ -0.23
HDDC3-201ENST00000330334 RHBDL2Q9NX52 303 aa13.63□□□□□ -0.23
HDDC3-201ENST00000330334 ANXA10Q9UJ72 324 aa13.63□□□□□ -0.23
HDDC3-201ENST00000330334 ETV7Q9Y603 341 aa13.63□□□□□ -0.23
HDDC3-201ENST00000330334 A0A0A6YYH2 397 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 MSGN1A6NI15 193 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 A6NJ64 397 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 SSX5O60225 188 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 CREBL2O60519 120 aaPredicted RBP13.62□□□□□ -0.23
HDDC3-201ENST00000330334 IGLV2-14P01704 120 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 SPNP16150 400 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 CD36P16671 472 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 GNG2P59768 71 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 KLF5Q13887 457 aaPredicted RBP13.62□□□□□ -0.23
HDDC3-201ENST00000330334 ZNF343Q6P1L6 599 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 LGALS14Q8TCE9 139 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 NUDCD2Q8WVJ2 157 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 RBMX2Q9Y388 322 aaKnown RBP13.62□□□□□ -0.23
HDDC3-201ENST00000330334 PRELID3BQ9Y3B1 194 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 TNCP24821 2201 aa13.62□□□□□ -0.23
HDDC3-201ENST00000330334 TUSC2O75896 110 aa13.61□□□□□ -0.23
HDDC3-201ENST00000330334 GP9P14770 177 aa13.61□□□□□ -0.23
HDDC3-201ENST00000330334 NFYAP23511 347 aaPredicted RBP13.61□□□□□ -0.23
HDDC3-201ENST00000330334 KCTD21Q4G0X4 260 aa13.61□□□□□ -0.23
HDDC3-201ENST00000330334 ADAD2Q8NCV1 583 aaKnown RBP13.61□□□□□ -0.23
HDDC3-201ENST00000330334 HSD17B10Q99714 261 aaKnown RBP13.61□□□□□ -0.23
HDDC3-201ENST00000330334 MRPS7Q9Y2R9 242 aaKnown RBP13.61□□□□□ -0.23
HDDC3-201ENST00000330334 IGLV1-51P01701 117 aa13.6□□□□□ -0.23
HDDC3-201ENST00000330334 OR9G9P0C7N8 305 aa13.6□□□□□ -0.23
HDDC3-201ENST00000330334 EIF4EBP1Q13541 118 aaPredicted RBP13.6□□□□□ -0.23
HDDC3-201ENST00000330334 CDK10Q15131 360 aa13.6□□□□□ -0.23
HDDC3-201ENST00000330334 MSMO1Q15800 293 aa13.6□□□□□ -0.23
HDDC3-201ENST00000330334 SRSF12Q8WXF0 261 aaKnown RBP13.6□□□□□ -0.23
HDDC3-201ENST00000330334 PHB2Q99623 299 aa13.6□□□□□ -0.23
HDDC3-201ENST00000330334 SPIN2AQ99865 258 aa13.6□□□□□ -0.23
HDDC3-201ENST00000330334 SPIN2BQ9BPZ2 258 aa13.6□□□□□ -0.23
HDDC3-201ENST00000330334 ZNF430Q9H8G1 570 aaPredicted RBP13.6□□□□□ -0.23
HDDC3-201ENST00000330334 PEF1Q9UBV8 284 aaKnown RBP13.6□□□□□ -0.23
HDDC3-201ENST00000330334 IGKV1D-13A0A0B4J2D9 117 aa13.59□□□□□ -0.23
HDDC3-201ENST00000330334 FCGR3BO75015 233 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms