RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CXorf66Q5JRM2 361 aaPredicted RBP16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 LEAP2Q969E1 77 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 GPR146Q96CH1 333 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 SLC25A31Q9H0C2 315 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 CBLN4Q9NTU7 201 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 GFOD1Q9NXC2 390 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 CTSZQ9UBR2 303 aa16.72■□□□□ 0.27
RIPPLY3-201ENST00000329553 YLPM1P49750 1951 aaKnown RBP16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 A0A1W2PPR1 153 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 hADV38S2A0JD32 116 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 ZNF729A6NN14 1252 aaPredicted RBP16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 SSSCA1O60232 199 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 ATP6V0CP27449 155 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 CLINT1Q14677 625 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 Q3ZCU0 254 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 RNF212Q495C1 297 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 ODF3L1Q8IXM7 274 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 FAM213BQ8TBF2 198 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 SLC35B3Q9H1N7 401 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 LINC00574Q9H8X3 128 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 RAB9BQ9NP90 201 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 USP24Q9UPU5 2620 aa16.71■□□□□ 0.27
RIPPLY3-201ENST00000329553 RAMP3O60896 148 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 MMP23AO75900 390 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 SOD3P08294 240 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 MMP9P14780 707 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 BRWD1-AS2P59051 145 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 RPL31P62899 125 aaKnown RBP16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 IZUMO4Q1ZYL8 232 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 KAAG1Q9UBP8 84 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 LINC00312Q9Y6C7 94 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 CFAP46Q8IYW2 2715 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 SLC31A2O15432 143 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 NDUFB3O43676 98 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 CLDN1O95832 211 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 IGKV1-5P01602 117 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 IFNA4P05014 189 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 SNRNP70P08621 437 aaKnown RBP16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 OR2B11Q5JQS5 317 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 C11orf71Q6IPW1 123 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 OR2G3Q8NGZ4 309 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 SMDT1Q9H4I9 107 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 IDI2-AS1Q9NZ38 188 aa16.7■□□□□ 0.26
RIPPLY3-201ENST00000329553 PIGBOS1A0A0B4J2F0 54 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 LINC00473A8K010 186 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 UMAD1C9J7I0 102 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 DVL1O14640 695 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 TMEM50AO95807 157 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 MT-ND4LP03901 98 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 GPR12P47775 334 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 RAB5BP61020 215 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 MEF2CQ06413 473 aaPredicted RBP16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 Q6ZRM9 215 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 SFT2D1Q8WV19 159 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 TCTEX1D2Q8WW35 142 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 MAGT1Q9H0U3 335 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 IFI27L2Q9H2X8 130 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 FBXO7Q9Y3I1 522 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 C17orf98A8MV24 154 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 EPHA1P21709 976 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 ERVFRD-1P60508 538 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 VAMP2P63027 116 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 CATR1Q13166 79 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 LRRC10Q5BKY1 277 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 CT45A1Q5HYN5 189 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 ZNF66Q6ZN08 573 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 CT45A3Q8NHU0 189 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 LSM10Q969L4 123 aaKnown RBP16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 RFNGQ9Y644 331 aa16.69■□□□□ 0.26
RIPPLY3-201ENST00000329553 HRNRQ86YZ3 2850 aaPredicted RBP16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 A0A1W2PPE3 182 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 BAXQ07812 192 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 TMEM200BQ69YZ2 307 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 OR5C1Q8NGR4 320 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 RNASE11Q8TAA1 199 aaKnown RBP16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 FAM216AQ8WUB2 273 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 C12orf57Q99622 126 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 HSD17B10Q99714 261 aaKnown RBP16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 RAB1BQ9H0U4 201 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 PCP4L1A6NKN8 68 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 M0R036 132 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 ITGB1BP1O14713 200 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 PRAMEF5Q5TYX0 476 aa16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 SP5Q6BEB4 398 aaPredicted RBP16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 H1FXQ92522 213 aaKnown RBP16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 RALYQ9UKM9 306 aaKnown RBP16.68■□□□□ 0.26
RIPPLY3-201ENST00000329553 A0A1B0GU03 582 aa16.67■□□□□ 0.26
RIPPLY3-201ENST00000329553 LY6HO94772 140 aa16.67■□□□□ 0.26
RIPPLY3-201ENST00000329553 NXPH3O95157 252 aa16.67■□□□□ 0.26
RIPPLY3-201ENST00000329553 SLC25A6P12236 298 aa16.67■□□□□ 0.26
RIPPLY3-201ENST00000329553 ZNF816Q0VGE8 651 aaPredicted RBP16.67■□□□□ 0.26
RIPPLY3-201ENST00000329553 RHEBQ15382 184 aa16.67■□□□□ 0.26
RIPPLY3-201ENST00000329553 RPL39P5Q59GN2 51 aa16.67■□□□□ 0.26
RIPPLY3-201ENST00000329553 SPSB3Q6PJ21 355 aa16.67■□□□□ 0.26
RIPPLY3-201ENST00000329553 ABHD14AQ9BUJ0 271 aa16.67■□□□□ 0.26
RIPPLY3-201ENST00000329553 C1orf196B1AJZ1 125 aa16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 CCL3L1P16619 93 aa16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 NCR3LG1Q68D85 454 aa16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 C1orf229Q6ZS94 237 aaPredicted RBP16.66■□□□□ 0.26
RIPPLY3-201ENST00000329553 BBC3Q96PG8 261 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms