RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 BTNL8Q6UX41 500 aa14.06□□□□□ -0.16
LMNB2-201ENST00000325327 TMEM140Q9NV12 185 aa14.06□□□□□ -0.16
LMNB2-201ENST00000325327 RABAC1Q9UI14 185 aa14.06□□□□□ -0.16
LMNB2-201ENST00000325327 J3KRW8 73 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 EFNA4P52798 201 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 HABP2Q14520 560 aaPredicted RBP14.05□□□□□ -0.16
LMNB2-201ENST00000325327 OPN4Q9UHM6 478 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 KBTBD11-OT1A0A1B0GTJ5 212 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 CDS2O95674 445 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 F12P00748 615 aaPredicted RBP14.05□□□□□ -0.16
LMNB2-201ENST00000325327 MBP02144 154 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 HIST3H3Q16695 136 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 OR11H7Q8NGC8 314 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 IGKV1-27A0A075B6S5 117 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 ZNF727A8MUV8 499 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 C5orf24Q7Z6I8 188 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 C5orf66Q9H5L9 145 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 PATZ1Q9HBE1 687 aaKnown RBP14.05□□□□□ -0.16
LMNB2-201ENST00000325327 HTN1P15515 57 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 COL8A2P25067 703 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 ZNF66Q6ZN08 573 aa14.05□□□□□ -0.16
LMNB2-201ENST00000325327 TRAV40A0A0B4J280 105 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 CEACAM8P31997 349 aaPredicted RBP14.04□□□□□ -0.16
LMNB2-201ENST00000325327 FAM78BQ5VT40 261 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 MMD2Q8IY49 270 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 C11orf44Q8N8P7 122 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 BPESC1Q9GZL8 116 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 TRAV24A0A0B4J272 114 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 ZNF503-AS2A6NEH8 195 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 LOXL3P58215 753 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 RHOBP62745 196 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 NCMAPQ5T1S8 102 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 CENPVQ7Z7K6 275 aaPredicted RBP14.04□□□□□ -0.16
LMNB2-201ENST00000325327 TMEM222Q9H0R3 208 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 METRNQ9UJH8 293 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 PSPNO60542 156 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 IGKV3-15P01624 115 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 OR4C13Q8NGP0 309 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 TMEM186Q96B77 213 aa14.04□□□□□ -0.16
LMNB2-201ENST00000325327 IGKV1D-33P01593 117 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 IGKV1-33P01594 117 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 NHLH2Q02577 135 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 TMEM208Q9BTX3 173 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 DCAF16Q9NXF7 216 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 PCSK4Q6UW60 755 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 A0A1B0GU03 582 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 FBP1P09467 338 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 TIGITQ495A1 244 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 OR4F17Q8NGA8 305 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 MLNRO43193 412 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 PPOXP50336 477 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 ANKRD55Q3KP44 614 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 SLC24A4Q8NFF2 622 aa14.03□□□□□ -0.16
LMNB2-201ENST00000325327 PLXNB3Q9ULL4 1909 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 IGHV3OR16-13A0A075B7E8 117 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 IGHV3-74A0A0B4J1X5 117 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 ETV2O00321 342 aaPredicted RBP14.02□□□□□ -0.16
LMNB2-201ENST00000325327 EIF3GO75821 320 aaKnown RBP eCLIP14.02□□□□□ -0.16
LMNB2-201ENST00000325327 C1QL1O75973 258 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 CCL1P22362 96 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 RPS10P46783 165 aaKnown RBP14.02□□□□□ -0.16
LMNB2-201ENST00000325327 MYPOPQ86VE0 399 aaPredicted RBP14.02□□□□□ -0.16
LMNB2-201ENST00000325327 GPR146Q96CH1 333 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 SLX1AQ9BQ83 275 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 SRRM5B3KS81 715 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 EGR1P18146 543 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 TCTE3Q8IZS6 198 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 OR10G4Q8NGN3 311 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 OR10G9Q8NGN4 311 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 OR10G7Q8NGN6 311 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 LURAP1Q96LR2 239 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 AAMDCQ9H7C9 122 aa14.02□□□□□ -0.16
LMNB2-201ENST00000325327 H0Y980 276 aa14.02□□□□□ -0.17
LMNB2-201ENST00000325327 TAGLN2P37802 199 aaKnown RBP14.02□□□□□ -0.17
LMNB2-201ENST00000325327 OR4X1Q8NH49 305 aa14.02□□□□□ -0.17
LMNB2-201ENST00000325327 Q8WTZ3 238 aa14.02□□□□□ -0.17
LMNB2-201ENST00000325327 TM2D1Q9BX74 207 aa14.02□□□□□ -0.17
LMNB2-201ENST00000325327 OR2A4O95047 310 aa14.02□□□□□ -0.17
LMNB2-201ENST00000325327 FXYD3Q14802 87 aa14.02□□□□□ -0.17
LMNB2-201ENST00000325327 NTNG2Q96CW9 530 aa14.02□□□□□ -0.17
LMNB2-201ENST00000325327 OR2A7Q96R45 310 aa14.02□□□□□ -0.17
LMNB2-201ENST00000325327 FAM103A1Q9BTL3 118 aaKnown RBP14.02□□□□□ -0.17
LMNB2-201ENST00000325327 INHBBP09529 407 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 BTN1A1Q13410 526 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 BRD3OSQ6XYD6 125 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 C15orf54Q8N8G6 183 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 NECAP1Q8NC96 275 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 OR1L4Q8NGR5 311 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 MRPL30Q8TCC3 161 aaKnown RBP14.01□□□□□ -0.17
LMNB2-201ENST00000325327 SMIM7Q9BQ49 75 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 NDFIP1Q9BT67 221 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
LMNB2-201ENST00000325327 EWSR1Q01844 656 aaKnown RBP eCLIP14.01□□□□□ -0.177e-7■■■■□ 24.6
LMNB2-201ENST00000325327 MIDNQ504T8 468 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 TP53RKQ96S44 253 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 LINC00312Q9Y6C7 94 aa14.01□□□□□ -0.17
LMNB2-201ENST00000325327 MAP1LC3B2A6NCE7 125 aa14□□□□□ -0.17
LMNB2-201ENST00000325327 SNAPINO95295 136 aa14□□□□□ -0.17
LMNB2-201ENST00000325327 RUNX1Q01196 453 aa14□□□□□ -0.17
LMNB2-201ENST00000325327 IGF2-ASQ6U949 168 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms