RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CUL9Q8IWT3 2517 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 PROP1O75360 226 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 OPN1MWP04001 364 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 OPN1MW2P0DN77 364 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 OPN1MW3P0DN78 364 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 ERVFRD-1P60508 538 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 ERVK-16P61578 105 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 SERF2P84101 59 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 CLEC12BQ2HXU8 276 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 NCMAPQ5T1S8 102 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 SLC16A13Q7RTY0 426 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 LYG1Q8N1E2 194 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 CISD2Q8N5K1 135 aaKnown RBP9.59□□□□□ -0.87
PTPN2-201ENST00000309660 SNRNP40Q96DI7 357 aaKnown RBP9.59□□□□□ -0.87
PTPN2-201ENST00000309660 S1PR3Q99500 378 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 TMEM147Q9BVK8 224 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 SMDT1Q9H4I9 107 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 TGIF2-C20orf24A0A0A6YYL0 155 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 A0A1B0GW64 132 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 SOX15O60248 233 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 GYPAP02724 150 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 DUTP33316 252 aaKnown RBP9.59□□□□□ -0.87
PTPN2-201ENST00000309660 GLRXP35754 106 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 ADIRFQ15847 76 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 DPPA3Q6W0C5 159 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 RBMXL3Q8N7X1 1067 aaKnown RBP9.59□□□□□ -0.87
PTPN2-201ENST00000309660 SNX22Q96L94 193 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 PSMG3Q9BT73 122 aaPredicted RBP9.59□□□□□ -0.87
PTPN2-201ENST00000309660 COA4Q9NYJ1 87 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 CALYQ9NYX4 217 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 TRAV3A0A0B4J244 114 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 CYB5BO43169 146 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 IFNA4P05014 189 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 TCF15Q12870 199 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 ZNF66Q6ZN08 573 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 Q6ZS92 163 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 FAM216BQ8N7L0 139 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 PINX1Q96BK5 328 aaKnown RBP9.58□□□□□ -0.88
PTPN2-201ENST00000309660 C1QTNF9BB2RNN3 333 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 RAB29O14966 203 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 CEACAM4O75871 244 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 IFNA1P01562 189 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 NDUFB7P17568 137 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 MDKP21741 143 aaPredicted RBP9.58□□□□□ -0.88
PTPN2-201ENST00000309660 KIAA0141Q14154 515 aaPredicted RBP9.58□□□□□ -0.88
PTPN2-201ENST00000309660 GCSAMLQ5JQS6 135 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 NECAP1Q8NC96 275 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 Q8WTZ3 238 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 ZNRD1Q9P1U0 126 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 LAMP3Q9UQV4 416 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 ARFGEF3Q5TH69 2177 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 CXCL1P09341 107 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 TUBG1P23258 451 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 ABHD12Q8N2K0 398 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 OR4F5Q8NH21 305 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 CIB3Q96Q77 187 aaPredicted RBP9.58□□□□□ -0.88
PTPN2-201ENST00000309660 OR4F4Q96R69 305 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 SMIM7Q9BQ49 75 aa9.58□□□□□ -0.88
PTPN2-201ENST00000309660 TNCP24821 2201 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 S100A9P06702 114 aaKnown RBP9.57□□□□□ -0.88
PTPN2-201ENST00000309660 WNT2P09544 360 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 UBE2G2P60604 165 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 C4orf17Q53FE4 359 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 TUBA4BQ9H853 241 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 TUBG2Q9NRH3 451 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 VAX2Q9UIW0 290 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 TMPRSS2O15393 492 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 CRYABP02511 175 aaKnown RBP9.57□□□□□ -0.88
PTPN2-201ENST00000309660 OR8U8P0C7N1 319 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 HTD2P86397 168 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 RNF212Q495C1 297 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 FAM90A2PQ658T7 463 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 FAM90A1Q86YD7 464 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 NANPQ8TBE9 248 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 ABHD17AQ96GS6 310 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 NPCDR1Q9BY65 106 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 EGLN1Q9GZT9 426 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 PATZ1Q9HBE1 687 aaKnown RBP9.57□□□□□ -0.88
PTPN2-201ENST00000309660 DSCAMO60469 2012 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 HCFC1P51610 2035 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 ABCA4P78363 2273 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 TRAV38-1A0A0B4J264 116 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 IRF2P14316 349 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 AGAP20933 346 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 MEOX2P50222 304 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 EIF4EBP1Q13541 118 aaPredicted RBP9.57□□□□□ -0.88
PTPN2-201ENST00000309660 PDZD11Q5EBL8 140 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 MRGPRGQ86SM5 289 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 RAB24Q969Q5 203 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 GCM1Q9NP62 436 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 CISD1Q9NZ45 108 aaKnown RBP9.57□□□□□ -0.88
PTPN2-201ENST00000309660 RNF7Q9UBF6 113 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 JPT1Q9UK76 154 aa9.57□□□□□ -0.88
PTPN2-201ENST00000309660 PPIHO43447 177 aaKnown RBP9.56□□□□□ -0.88
PTPN2-201ENST00000309660 FOLR2P14207 255 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 NDUFA6P56556 154 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 TRAT1Q6PIZ9 186 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 CA5BP1Q8WTZ4 195 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 OR6C3Q9NZP0 311 aa9.56□□□□□ -0.88
PTPN2-201ENST00000309660 TRGV10A0A0A0MS01 117 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms