RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 RND1Q92730 232 aa15.5■□□□□ 0.07
PDLIM4-201ENST00000253754 HSD17B10Q99714 261 aaKnown RBP15.5■□□□□ 0.07
PDLIM4-201ENST00000253754 SLC31A2O15432 143 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 FCGR3BO75015 233 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 IGHV1-46P01743 117 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 GZMHP20718 246 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 CD40P25942 277 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 DUTP33316 252 aaKnown RBP15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 LOXL3P58215 753 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 OR2B8PP59922 312 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 DPPA3Q6W0C5 159 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 DTD1Q8TEA8 209 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 VKORC1Q9BQB6 163 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 GCM1Q9NP62 436 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 GNG13Q9P2W3 67 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 PLCE1Q9P212 2302 aa15.49■□□□□ 0.07
PDLIM4-201ENST00000253754 A0A1W2PPE2 198 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 A0A1W2PPE3 182 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 A0A1W2PPH5 198 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 C1orf229Q6ZS94 237 aaPredicted RBP15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 SSX9Q7RTT3 188 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 VKORC1L1Q8N0U8 176 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 HIST1H2BAQ96A08 127 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 DCAF16Q9NXF7 216 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 M0R1X1 148 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 RAB29O14966 203 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 OR9G9P0C7N8 305 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 ZNF506Q5JVG8 444 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 Q8TCH9 128 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 TAF15Q92804 592 aaKnown RBP eCLIP15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 RCC1LQ96I51 464 aaKnown RBP15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 QTRT1Q9BXR0 403 aaKnown RBP15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 ZNF665Q9H7R5 613 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 JPT1Q9UK76 154 aa15.48■□□□□ 0.07
PDLIM4-201ENST00000253754 C16orf97H3BN30 126 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 CASP6P55212 293 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 TNFAIP6P98066 277 aaPredicted RBP15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 C3orf36Q3SXR2 165 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 C15orf54Q8N8G6 183 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 PPP1R35Q8TAP8 253 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 EDARADDQ8WWZ3 215 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 R3HDM4Q96D70 268 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 PSMG3Q9BT73 122 aaPredicted RBP15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 IFI27L2Q9H2X8 130 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 CALYQ9NYX4 217 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 RAB13P51153 203 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 SMDT1Q9H4I9 107 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 ELOVL5Q9NYP7 299 aa15.47■□□□□ 0.07
PDLIM4-201ENST00000253754 ZFP92A6NM28 416 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 PMS2P5A8MQ11 134 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 CEBPZOSA8MTT3 80 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 H3BQ15 152 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 IGKV1D-33P01593 117 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 IGKV1-33P01594 117 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 HBE1P02100 147 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 ZNF787Q6DD87 383 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 ST6GALNAC3Q8NDV1 305 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 HIPK2Q9H2X6 1198 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 JKAMPQ9P055 326 aa15.46■□□□□ 0.07
PDLIM4-201ENST00000253754 YPEL1O60688 119 aa15.46■□□□□ 0.06
PDLIM4-201ENST00000253754 RAB2AP61019 212 aa15.46■□□□□ 0.06
PDLIM4-201ENST00000253754 RHEBQ15382 184 aa15.46■□□□□ 0.06
PDLIM4-201ENST00000253754 C17orf58Q2M2W7 97 aa15.46■□□□□ 0.06
PDLIM4-201ENST00000253754 CR1LQ2VPA4 569 aa15.46■□□□□ 0.06
PDLIM4-201ENST00000253754 YPEL2Q96QA6 119 aa15.46■□□□□ 0.06
PDLIM4-201ENST00000253754 TRAV1-1A0A0B4J248 108 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 LOC102723971A0A1B0GUV8 181 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 TMEM8BA6NDV4 472 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 F2RL2O00254 374 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 OR8U8P0C7N1 319 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 SFTPCP11686 197 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 GATA4P43694 442 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 RPS23P62266 143 aaKnown RBP15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 WFDC8Q8IUA0 241 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 ZCCHC24Q8N2G6 241 aaKnown RBP15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 TCTEX1D1Q8N7M0 179 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 RNF7Q9UBF6 113 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 DOCK11Q5JSL3 2073 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 hCG_1809904A0A1W2PP81 198 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 A0A1W2PR64 198 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 A0A1W2PRV1 198 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 GYPAP02724 150 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 HSPB1P04792 205 aaKnown RBP15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 FOSL1P15407 271 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 PAX6P26367 422 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 CA7P43166 264 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 TFF3Q07654 80 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 HABP2Q14520 560 aaPredicted RBP15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 TMEM41BQ5BJD5 291 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 FAM24BQ8N5W8 94 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 FAM216BQ8N7L0 139 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 RAB39BQ96DA2 213 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 CCL13Q99616 98 aa15.45■□□□□ 0.06
PDLIM4-201ENST00000253754 ROS1P08922 2347 aa15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 DSCAMO60469 2012 aa15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 HMGB3O15347 200 aaKnown RBP15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 HOXA1P49639 335 aaPredicted RBP15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 SELENOVP59797 346 aa15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 SERF2P84101 59 aa15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 STUMQ69YW2 141 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms