RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Tmbim4Q9DA39 238 aa3.37□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Zfp869Q9DC47 529 aa3.37□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Elp4Q9ER73 422 aa3.37□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gpr34Q9R1K6 375 aa3.37□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Ch25hQ9Z0F5 298 aa3.37□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Skp2Q9Z0Z3 424 aa3.37□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Rasal1Q9Z268 799 aa3.37□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Notch3Q61982 2318 aa3.37□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Trav6-7-dv9A0A075B639 125 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 PvrigA0A1B0GS01 234 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm45800A0A1B0GT24 152 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Zfp978A2A7I1 335 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm364A2AFI6 671 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Slc35d1A2AKQ0 355 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm12789B1AUV7 164 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 IqckD3YYL3 290 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Olfr619E9PV95 320 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Olfr571E9Q407 322 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Ccdc71lE9Q4T4 218 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm6665F6Y363 85 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm11009F7CWA7 138 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm8888J3QPX5 126 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Olfr1154L7MU57 310 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Zfp955bL7N232 545 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Mpzl2O70255 215 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Cops4O88544 406 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Slc28a2O88627 660 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 CyctP00015 105 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Htr5aP30966 357 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Hsf2P38533 535 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Tac1P41539 130 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Reg1P43137 165 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Il11P47873 199 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Dnase1P49183 284 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Mnat1P51949 309 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Aqp4P55088 323 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Tas2r123P59528 333 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Apoa1Q00623 264 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Cab39Q06138 341 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 MedagQ14BA6 303 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm10188Q3V432 135 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 RilpQ5ND29 369 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Fam57aQ5ND56 257 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gata6Q61169 589 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 OmgQ63912 440 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Tas2r106Q7M724 308 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Olfr875Q7TRE5 310 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Olfr169Q7TS53 313 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Clec4b1Q7TS58 209 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Cst13Q80ZN5 141 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Stk35Q80ZW0 539 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Wdr82Q8BFQ4 313 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Zfp3Q8BLB0 497 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gpr89aQ8BS95 455 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 E330017A01RikQ8BU47 192 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 GmdsQ8K0C9 372 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Tmem129Q8K304 362 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Vmn1r198Q8R263 300 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Ccdc80Q8R2G6 949 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Ccdc92Q8VDN4 314 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Paip1Q8VE62 400 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Olfr854Q8VFF1 315 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Dtnbp1Q91WZ8 352 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 QprtQ91X91 299 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Pskh1Q91YA2 424 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Metap1dQ9CPW9 335 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gnpda2Q9CRC9 276 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Ociad1Q9CRD0 247 aaKnown RBP3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Twist2Q9D030 160 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 PlgrktQ9D3P8 147 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 IqcdQ9D3V1 458 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Slc48a1Q9D8M3 146 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Fank1Q9DAM9 344 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Btbd17Q9DB72 478 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Keg1Q9DCY0 295 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Oasl2Q9Z2F2 508 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Ighv4-1A0A075B5R5 116 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Olfr576A0A0G2JFH3 312 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Slc37a4A0A1L1SUI3 450 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Trav12-2A0N8N6 114 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Mrap2D3Z1Q2 207 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Olfr585E9PXW4 318 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Vmn2r83E9Q0G7 864 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm8127E9Q0P0 100 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 A530032D15RikE9Q422 215 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Vmn1r27K7N688 303 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm3512L7N206 146 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm20939L7N243 523 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm3115L7N285 211 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm8024L7N2E0 100 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gm17174M0QWQ9 212 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 ClockO08785 855 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 LhbO09108 141 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Rnase2O35291 155 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Il1bP10749 269 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Cd1d2P11610 336 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Selenbp1P17563 472 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Gabra2P26048 451 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 NodalP43021 354 aa3.36□□□□□ -1.87
Hmgb1-203ENSMUST00000110505 Ube2e1P52482 193 aa3.36□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms