RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 DLX4Q92988 240 aaPredicted RBP12.67□□□□□ -0.38
COLCA2-207ENST00000639470 CABLES2Q9BTV7 478 aa12.67□□□□□ -0.38
COLCA2-207ENST00000639470 SDHAF2Q9NX18 166 aa12.67□□□□□ -0.38
COLCA2-207ENST00000639470 FOXA2Q9Y261 457 aaPredicted RBP12.67□□□□□ -0.38
COLCA2-207ENST00000639470 PDCD5O14737 125 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 CRIP2P52943 208 aaPredicted RBP12.66□□□□□ -0.38
COLCA2-207ENST00000639470 CD69Q07108 199 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 ZNF616Q08AN1 781 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 C9orf66Q5T8R8 295 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 UBE2UQ5VVX9 321 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 ZNF660Q6AZW8 331 aaPredicted RBP12.66□□□□□ -0.38
COLCA2-207ENST00000639470 UNQ5815/PRO19632Q6UWF5 114 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 HAPLN4Q86UW8 402 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 OR4A4PQ8NGN8 299 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 GPR61Q9BZJ8 451 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 ATG5Q9H1Y0 275 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 OR51E2Q9H255 320 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 SLC35D1Q9NTN3 355 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 TXNL4BQ9NX01 149 aaKnown RBP12.66□□□□□ -0.38
COLCA2-207ENST00000639470 BLOC1S6Q9UL45 172 aa12.66□□□□□ -0.38
COLCA2-207ENST00000639470 TRBV6-7A0A0A0MS04 114 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 SRRM4A7MD48 611 aaKnown RBP12.65□□□□□ -0.38
COLCA2-207ENST00000639470 APELAP0DMC3 54 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 MC5RP33032 325 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 GABARAPL2P60520 117 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 MRGPRG-AS1Q2M3A8 158 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 VAX1Q5SQQ9 334 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 BVESQ8NE79 360 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 ASCL2Q99929 193 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 B9D2Q9BPU9 175 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 TOLLIPQ9H0E2 274 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 MGAT4AQ9UM21 535 aa12.65□□□□□ -0.38
COLCA2-207ENST00000639470 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
COLCA2-207ENST00000639470 RAB6AP20340 208 aa12.64□□□□□ -0.39
COLCA2-207ENST00000639470 RUNX1Q01196 453 aa12.64□□□□□ -0.39
COLCA2-207ENST00000639470 ARFRP1Q13795 201 aa12.64□□□□□ -0.39
COLCA2-207ENST00000639470 FXYD3Q14802 87 aa12.64□□□□□ -0.39
COLCA2-207ENST00000639470 ACTBL2Q562R1 376 aa12.64□□□□□ -0.39
COLCA2-207ENST00000639470 OR5T1Q8NG75 326 aa12.64□□□□□ -0.39
COLCA2-207ENST00000639470 NUDCD2Q8WVJ2 157 aa12.64□□□□□ -0.39
COLCA2-207ENST00000639470 ARPC1AQ92747 370 aa12.64□□□□□ -0.39
COLCA2-207ENST00000639470 DAPK2Q9UIK4 370 aa12.64□□□□□ -0.39
COLCA2-207ENST00000639470 COL7A1Q02388 2944 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
COLCA2-207ENST00000639470 RBBP9O75884 186 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 APOA2P02652 100 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 CRYGBP07316 175 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 PSMD7P51665 324 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 TPPP2P59282 170 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 MRPS15P82914 257 aaKnown RBP12.63□□□□□ -0.39
COLCA2-207ENST00000639470 TAGLNQ01995 201 aaKnown RBP12.63□□□□□ -0.39
COLCA2-207ENST00000639470 MXD1Q05195 221 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 CDNFQ49AH0 187 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 ZNF562Q6V9R5 426 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 IDO2Q6ZQW0 420 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 PDPNQ86YL7 162 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 H1FOOQ8IZA3 346 aaPredicted RBP12.63□□□□□ -0.39
COLCA2-207ENST00000639470 OR10J5Q8NHC4 309 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 LGALS14Q8TCE9 139 aa12.63□□□□□ -0.39
COLCA2-207ENST00000639470 FLYWCH2Q96CP2 140 aaKnown RBP12.63□□□□□ -0.39
COLCA2-207ENST00000639470 TMEM235A6NFC5 223 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 LINC00473A8K010 186 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 OVOL1O14753 267 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 SSX5O60225 188 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 LY86O95711 162 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 FCER2P06734 321 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 LGALS1P09382 135 aaKnown RBP12.62□□□□□ -0.39
COLCA2-207ENST00000639470 OR8U8P0C7N1 319 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 PTHLHP12272 177 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 GADD45AP24522 165 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 OR5H6Q8NGV6 325 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 HARBI1Q96MB7 349 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 TSNAXQ99598 290 aaKnown RBP12.62□□□□□ -0.39
COLCA2-207ENST00000639470 CHCHD6Q9BRQ6 235 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 ST6GALNAC5Q9BVH7 336 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 ADAM30Q9UKF2 790 aa12.62□□□□□ -0.39
COLCA2-207ENST00000639470 RRP15Q9Y3B9 282 aaKnown RBP12.62□□□□□ -0.39
COLCA2-207ENST00000639470 DNAH9Q9NYC9 4486 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 IGKV1D-13A0A0B4J2D9 117 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 NOTOA8MTQ0 251 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 LINC01619G3V211 115 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 IGKV1-13P0DP09 117 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 NFYAP23511 347 aaPredicted RBP12.61□□□□□ -0.39
COLCA2-207ENST00000639470 SDC2P34741 201 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 TGFBR1P36897 503 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 OR2B11Q5JQS5 317 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.61□□□□□ -0.39
COLCA2-207ENST00000639470 DDB2Q92466 427 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 GINS4Q9BRT9 223 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 STUB1Q9UNE7 303 aa12.61□□□□□ -0.39
COLCA2-207ENST00000639470 RBM7Q9Y580 266 aaKnown RBP12.61□□□□□ -0.39
COLCA2-207ENST00000639470 SAP30O75446 220 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 SPDEFO95238 335 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 TRGV3P03979 118 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 FGF9P31371 208 aaPredicted RBP12.6□□□□□ -0.39
COLCA2-207ENST00000639470 TALDO1P37837 337 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 SERPINB10P48595 397 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 RPL30P62888 115 aaKnown RBP12.6□□□□□ -0.39
COLCA2-207ENST00000639470 NEDD8Q15843 81 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms