RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 FREM1Q5H8C1 2179 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 F5H5K5 113 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 CSTAP01040 98 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 HBZP02008 142 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 HSPA9P38646 679 aaKnown RBP0.41□□□□□ -2.34
SRP54-214ENST00000630962 UBE2KP61086 200 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 AP1S1P61966 158 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 DYNLL1P63167 89 aaKnown RBP0.41□□□□□ -2.34
SRP54-214ENST00000630962 CLEC12BQ2HXU8 276 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 OR10J3Q5JRS4 329 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 C7orf65Q6ZTY9 151 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 TMEM86AQ8N2M4 240 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 RORBQ92753 470 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 MS4A6EQ96DS6 147 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 SMIM12Q96EX1 92 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 TMA16Q96EY4 203 aaKnown RBP0.41□□□□□ -2.34
SRP54-214ENST00000630962 GNB1LQ9BYB4 327 aa0.41□□□□□ -2.34
SRP54-214ENST00000630962 NPATQ14207 1427 aa0.4□□□□□ -2.34
SRP54-214ENST00000630962 A0A1B0GW15 77 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 GOLGA6L10A6NI86 522 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 CREBL2O60519 120 aaPredicted RBP0.4□□□□□ -2.35
SRP54-214ENST00000630962 MT-CO2P00403 227 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 CST4P01036 141 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 CFL1P23528 166 aaKnown RBP0.4□□□□□ -2.35
SRP54-214ENST00000630962 OR10J1P30954 320 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 GABRA2P47869 451 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 REG1BP48304 166 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 FXYD7P58549 80 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 LINC00313P59037 77 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 SURF2Q15527 256 aaPredicted RBP0.4□□□□□ -2.35
SRP54-214ENST00000630962 MIAQ16674 131 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 Q1T7F1 81 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 TMEM31Q5JXX7 168 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 SPATA31B1PQ5VZV4 182 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 SLC36A1Q7Z2H8 476 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 RPS4Y2Q8TD47 263 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 CYGBQ8WWM9 190 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 CCDC124Q96CT7 223 aaKnown RBP0.4□□□□□ -2.35
SRP54-214ENST00000630962 C22orf24Q9Y442 160 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 CUL9Q8IWT3 2517 aa0.4□□□□□ -2.35
SRP54-214ENST00000630962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.39□□□□□ -2.35
SRP54-214ENST00000630962 TRAV8-1A0A0A6YYK1 113 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 A0A1B0GW54 56 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 ATP8B1O43520 1251 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 SYNGR1O43759 233 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 FADS2O95864 444 aaKnown RBP0.39□□□□□ -2.35
SRP54-214ENST00000630962 TAS2R20P59543 309 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 TPI1P60174 286 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 SNAP25P60880 206 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 AKR1C1Q04828 323 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 RAB31Q13636 194 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 OR4D1Q15615 310 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 USF2Q15853 346 aaPredicted RBP0.39□□□□□ -2.35
SRP54-214ENST00000630962 ZNF705AQ6ZN79 300 aaPredicted RBP0.39□□□□□ -2.35
SRP54-214ENST00000630962 OR1L8Q8NGR8 309 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 RABL2AQ9UBK7 228 aaPredicted RBP0.39□□□□□ -2.35
SRP54-214ENST00000630962 EIF4G1Q04637 1599 aaKnown RBP0.39□□□□□ -2.35
SRP54-214ENST00000630962 POLEQ07864 2286 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 AHNAK2Q8IVF2 5795 aa0.39□□□□□ -2.35
SRP54-214ENST00000630962 NUP160Q12769 1436 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 DICER1Q9UPY3 1922 aaKnown RBP0.38□□□□□ -2.35
SRP54-214ENST00000630962 PTPRBP23467 1997 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 NUP153P49790 1475 aaKnown RBP0.38□□□□□ -2.35
SRP54-214ENST00000630962 IGHV1-18A0A0C4DH31 117 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 A0A0J9YW62 118 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 GOLGA8RI6L899 631 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 GEMIN2O14893 280 aaKnown RBP0.38□□□□□ -2.35
SRP54-214ENST00000630962 ARL6IP5O75915 188 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 LIMS3P0CW19 117 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 LIMS4P0CW20 117 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 NUP62P37198 522 aaPredicted RBP0.38□□□□□ -2.35
SRP54-214ENST00000630962 DAPP51397 102 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 RAB8AP61006 207 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 TNNC1P63316 161 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 PLPPR5Q32ZL2 321 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 ARHGAP11BQ3KRB8 267 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 OR51T1Q8NGJ9 327 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 OR13C8Q8NGS7 320 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 TLCD1Q96CP7 247 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 MSANTD3Q96H12 275 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 EMC3Q9P0I2 261 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 RBMX2Q9Y388 322 aaKnown RBP0.38□□□□□ -2.35
SRP54-214ENST00000630962 MAP3K19Q56UN5 1328 aa0.38□□□□□ -2.35
SRP54-214ENST00000630962 MYOFQ9NZM1 2061 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 CACNA1BQ00975 2339 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 REREQ9P2R6 1566 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 H7C2G1 150 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 SGCEO43556 437 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 CCDC172P0C7W6 258 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 CA5AP35218 305 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 OR10A3P58181 314 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 TBPL1P62380 186 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 HERVK_113P63121 156 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 EMX1Q04741 257 aaPredicted RBP0.37□□□□□ -2.35
SRP54-214ENST00000630962 MOGQ16653 247 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 LGALS9BQ3B8N2 356 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 Q8N2B8 174 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 FAM19A2Q8N3H0 131 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 DAND5Q8N907 189 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 C12orf29Q8N999 325 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms