RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 S100A12P80511 92 aa16.35■□□□□ 0.21
PCDHB11-202ENST00000624887 ARL16Q0P5N6 197 aa16.35■□□□□ 0.21
PCDHB11-202ENST00000624887 PEA15Q15121 130 aa16.35■□□□□ 0.21
PCDHB11-202ENST00000624887 GUK1Q16774 197 aa16.35■□□□□ 0.21
PCDHB11-202ENST00000624887 RND1Q92730 232 aa16.35■□□□□ 0.21
PCDHB11-202ENST00000624887 GAFA1Q96PS6 74 aa16.35■□□□□ 0.21
PCDHB11-202ENST00000624887 RAB9BQ9NP90 201 aa16.35■□□□□ 0.21
PCDHB11-202ENST00000624887 SPTBN4Q9H254 2564 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 DSCAML1Q8TD84 2053 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 MED19A0JLT2 244 aaPredicted RBP16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 CD55P08174 381 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 IRF2P14316 349 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 C17orf58Q2M2W7 97 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 SPANXN5Q5MJ07 72 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 TEX36Q5VZQ5 186 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 DHRS7BQ6IAN0 325 aaPredicted RBP16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 HAPLN4Q86UW8 402 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 PLPPR2Q96GM1 343 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 ABHD14AQ9BUJ0 271 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 FAM234AQ9H0X4 552 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 ZNF665Q9H7R5 613 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 DYSFO75923 2080 aa16.34■□□□□ 0.21
PCDHB11-202ENST00000624887 C17orf100A8MU93 164 aa16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 ITGB1BP1O14713 200 aa16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 F12P00748 615 aaPredicted RBP16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 TNFRSF1AP19438 455 aa16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 NCR3LG1Q68D85 454 aa16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 DUX4L9Q6RFH8 374 aaPredicted RBP16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 UNQ6494/PRO21346Q6UXR6 183 aa16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 ZNF788Q6ZQV5 615 aa16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 H2BFWTQ7Z2G1 175 aa16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 ZNF525Q8N782 197 aa16.33■□□□□ 0.21
PCDHB11-202ENST00000624887 ZNF134P52741 427 aa16.33■□□□□ 0.2
PCDHB11-202ENST00000624887 SLC25A24Q6NUK1 477 aa16.33■□□□□ 0.2
PCDHB11-202ENST00000624887 TMEM14EPQ6UXP3 125 aa16.33■□□□□ 0.2
PCDHB11-202ENST00000624887 DEFB108BQ8NET1 73 aa16.33■□□□□ 0.2
PCDHB11-202ENST00000624887 VKORC1Q9BQB6 163 aa16.33■□□□□ 0.2
PCDHB11-202ENST00000624887 IFI27L2Q9H2X8 130 aa16.33■□□□□ 0.2
PCDHB11-202ENST00000624887 SAV1Q9H4B6 383 aaPredicted RBP16.33■□□□□ 0.2
PCDHB11-202ENST00000624887 RAI1Q7Z5J4 1906 aaPredicted RBP16.33■□□□□ 0.2
PCDHB11-202ENST00000624887 NBEAQ8NFP9 2946 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 KBTBD11-OT1A0A1B0GTJ5 212 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 A0A1B0GW64 132 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 CCL8P80075 99 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 AKR1C8PQ5T2L2 129 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 DPPA3Q6W0C5 159 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 TGIF2LYQ8IUE0 185 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 PBDC1Q9BVG4 233 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 EIF5A2Q9GZV4 153 aaKnown RBP16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 CLN8Q9UBY8 286 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 TANC2Q9HCD6 1990 aa16.32■□□□□ 0.2
PCDHB11-202ENST00000624887 TRGV10A0A0A0MS01 117 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 MARCH11A6NNE9 402 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 GYPAP02724 150 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 THNSL2Q86YJ6 484 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 ZCCHC14Q8WYQ9 949 aaKnown RBP16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 WFIKKN1Q96NZ8 548 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 CCL13Q99616 98 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 HIPK2Q9H2X6 1198 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 GFOD1Q9NXC2 390 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 GAB2Q9UQC2 676 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 PCNX1Q96RV3 2341 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 NPBWR1P48145 328 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 PPT1P50897 306 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 RAB7AP51149 207 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 ADAM5Q6NVV9 412 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 SPSB3Q6PJ21 355 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 SCGB1C1Q8TD33 95 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 PARD6GQ9BYG4 376 aaPredicted RBP16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 DCAF16Q9NXF7 216 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 KPTNQ9Y664 436 aa16.31■□□□□ 0.2
PCDHB11-202ENST00000624887 BTBD17A6NE02 478 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 M0R1X1 148 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 RBFOX2O43251 390 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 PPIHO43447 177 aaKnown RBP16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 FCGR3BO75015 233 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 HPRT1P00492 218 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 OR8U8P0C7N1 319 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 SP5Q6BEB4 398 aaPredicted RBP16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 TCF23Q7RTU1 214 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 LILRB2Q8N423 598 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 FAM216BQ8N7L0 139 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 R3HDM4Q96D70 268 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 NGBQ9NPG2 151 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 MLXQ9UH92 298 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 FBXO7Q9Y3I1 522 aa16.3■□□□□ 0.2
PCDHB11-202ENST00000624887 GPR37O15354 613 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 IGHV3-7P01780 117 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 LRRC75BQ2VPJ9 315 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 RPL39P5Q59GN2 51 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 PSMG3Q9BT73 122 aaPredicted RBP16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 LINC00574Q9H8X3 128 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 A0A1B0GV50 99 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 SLC31A2O15432 143 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 RAB13P51153 203 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 DTD1Q8TEA8 209 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 CORO2AQ92828 525 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 CIB3Q96Q77 187 aaPredicted RBP16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 SMDT1Q9H4I9 107 aa16.29■□□□□ 0.2
PCDHB11-202ENST00000624887 TLN1Q9Y490 2541 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms