RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 LOC100509620A0A075B734 347 aa10.25□□□□□ -0.77
SRRT-216ENST00000618262 ZNF83P51522 516 aa10.25□□□□□ -0.77
SRRT-216ENST00000618262 TAS2R19P59542 299 aa10.25□□□□□ -0.77
SRRT-216ENST00000618262 RPL23AP62750 156 aaKnown RBP10.25□□□□□ -0.77
SRRT-216ENST00000618262 TMEM41BQ5BJD5 291 aa10.25□□□□□ -0.77
SRRT-216ENST00000618262 OLFML2AQ68BL7 652 aa10.25□□□□□ -0.77
SRRT-216ENST00000618262 TMEM42Q69YG0 159 aa10.25□□□□□ -0.77
SRRT-216ENST00000618262 MEPCEQ7L2J0 689 aaKnown RBP10.25□□□□□ -0.77
SRRT-216ENST00000618262 NEU4Q8WWR8 484 aaPredicted RBP10.25□□□□□ -0.77
SRRT-216ENST00000618262 RNF183Q96D59 192 aa10.25□□□□□ -0.77
SRRT-216ENST00000618262 ACY3Q96HD9 319 aa10.25□□□□□ -0.77
SRRT-216ENST00000618262 GCM1Q9NP62 436 aa10.25□□□□□ -0.77
SRRT-216ENST00000618262 FAM90A27PA6NNH2 459 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 IL2RAP01589 272 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 SERPINE2P07093 398 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 ZNF154Q13106 437 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 LRRC37A5PQ49AS3 106 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 C12orf73Q69YU5 71 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 OR1B1Q8NGR6 318 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 BLNKQ8WV28 456 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 SLC35B3Q9H1N7 401 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 CMC2Q9NRP2 79 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 AK6Q9Y3D8 172 aaKnown RBP10.24□□□□□ -0.77
SRRT-216ENST00000618262 CADP27708 2225 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 GABARAPH6UMI1 98 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 PRSS12P56730 875 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 LCN2P80188 198 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 CEACAM16Q2WEN9 425 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 FAM78BQ5VT40 261 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 OR2AE1Q8NHA4 323 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 SLC25A44Q96H78 314 aaPredicted RBP10.24□□□□□ -0.77
SRRT-216ENST00000618262 HIST1H2AAQ96QV6 131 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 SRSF8Q9BRL6 282 aaKnown RBP10.24□□□□□ -0.77
SRRT-216ENST00000618262 EIF5A2Q9GZV4 153 aaKnown RBP10.24□□□□□ -0.77
SRRT-216ENST00000618262 ELL3Q9HB65 397 aaPredicted RBP10.24□□□□□ -0.77
SRRT-216ENST00000618262 UQCR10Q9UDW1 63 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 ETV7Q9Y603 341 aa10.24□□□□□ -0.77
SRRT-216ENST00000618262 A0A0G2JNJ9 132 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 A0A1W2PRX2 142 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 C1QL1O75973 258 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 IGHG1P01857 330 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 GLI4P10075 376 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 KIR2DL2P43627 348 aaPredicted RBP10.23□□□□□ -0.77
SRRT-216ENST00000618262 DAP3P51398 398 aaKnown RBP10.23□□□□□ -0.77
SRRT-216ENST00000618262 ACSM6Q6P461 480 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 PRSS45Q7RTY3 260 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 ZNF843Q8N446 348 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 OR4X1Q8NH49 305 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 PSMG3Q9BT73 122 aaPredicted RBP10.23□□□□□ -0.77
SRRT-216ENST00000618262 Q9N2K0 584 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 CLCF1Q9UBD9 225 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 Q9UFV3 132 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 GCN1Q92616 2671 aaKnown RBP10.23□□□□□ -0.77
SRRT-216ENST00000618262 A0A0B4J2A0 478 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 SIGLEC15Q6ZMC9 328 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 SAXO1Q8IYX7 474 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 OR6N2Q8NGY6 317 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 ABHD4Q8TB40 342 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 CDH20Q9HBT6 801 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 SHPKQ9UHJ6 478 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 POLR1DQ9Y2S0 133 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 CELSR2Q9HCU4 2923 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 ZG16O60844 167 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 RENP00797 406 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 MAS1P04201 325 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 GRNP28799 593 aaKnown RBP10.23□□□□□ -0.77
SRRT-216ENST00000618262 HINT1P49773 126 aaPredicted RBP10.23□□□□□ -0.77
SRRT-216ENST00000618262 LY6G6FQ5SQ64 297 aa10.23□□□□□ -0.77
SRRT-216ENST00000618262 PAQR4Q8N4S7 273 aaPredicted RBP10.23□□□□□ -0.77
SRRT-216ENST00000618262 VPS13CQ709C8 3753 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 ABCA4P78363 2273 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 SVEP1Q4LDE5 3571 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 ABHD16AO95870 558 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 SNRPGP62308 76 aaKnown RBP10.22□□□□□ -0.77
SRRT-216ENST00000618262 SRPXP78539 464 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 SOHLH1Q5JUK2 328 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 Q6ZN92 141 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 FAM214BQ7L5A3 538 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 NR2C2APQ86WQ0 139 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 MS4A10Q96PG2 267 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 C1orf43Q9BWL3 253 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 MAP1LC3CQ9BXW4 147 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 MRPL16Q9NX20 251 aaKnown RBP10.22□□□□□ -0.77
SRRT-216ENST00000618262 B9D1Q9UPM9 204 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 F5H768 121 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 CLDN1O95832 211 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 FKBP2P26885 142 aaKnown RBP10.22□□□□□ -0.77
SRRT-216ENST00000618262 ERVK11-1P61568 191 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 ADAM8P78325 824 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 COL10A1Q03692 680 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 FAM27E3Q08E93 113 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 OR52N5Q8NH56 324 aa10.22□□□□□ -0.77
SRRT-216ENST00000618262 NBPF19A0A087WUL8 3843 aa10.21□□□□□ -0.77
SRRT-216ENST00000618262 AGFG2O95081 481 aa10.21□□□□□ -0.77
SRRT-216ENST00000618262 HLA-HP01893 362 aa10.21□□□□□ -0.77
SRRT-216ENST00000618262 TMEM267Q0VDI3 215 aaPredicted RBP10.21□□□□□ -0.77
SRRT-216ENST00000618262 SFXN4Q6P4A7 337 aa10.21□□□□□ -0.77
SRRT-216ENST00000618262 TCTEX1D1Q8N7M0 179 aa10.21□□□□□ -0.77
SRRT-216ENST00000618262 FGFBP3Q8TAT2 258 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms