RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	GABRG2	P18507	467 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	OR4P4	Q8NGL7	312 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	LOXL4	Q96JB6	756 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	COL4A6	Q14031	1691 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	SNAI2	O43623	268 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	USF1	P22415	310 aa	Predicted RBP	13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	UBE2V1	Q13404	147 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	RTL10	Q7L3V2	364 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	OR2Y1	Q8NGV0	311 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	PNRC2	Q9NPJ4	139 aa	Known RBP	13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	VAMP5	O95183	116 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	VENTX	O95231	258 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	EDDM3A	Q14507	147 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	MIC13	Q5XKP0	118 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	OR2M3	Q8NG83	312 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	OR5B3	Q8NH48	314 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	OCC1	Q8TAD7	63 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	C20orf144	Q9BQM9	153 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	FBXL7	Q9UJT9	491 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	RARRES3	Q9UL19	164 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	IL6R	P08887	468 aa	Predicted RBP	13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	CCL1	P22362	96 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	ATP23	Q9Y6H3	246 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	DNAH14	Q0VDD8	3507 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179		M0R1X1	148 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	NUDT3	O95989	172 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	UQCRFS1	P47985	274 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	ERVK-16	P61578	105 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	GNB1	P62873	340 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	CD207	Q9UJ71	328 aa		13.31	□□□□□ -0.28
SYNRG-223	ENST00000616179	FBLL1	A6NHQ2	334 aa	Known RBP	13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	PSG4	Q00888	419 aa		13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	HIST3H3	Q16695	136 aa		13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	SPACA9	Q96E40	222 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	GNB4	Q9HAV0	340 aa		13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	CDH23	Q9H251	3354 aa		13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	PRR19	A6NJB7	356 aa		13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	CXorf67	Q86X51	503 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	ZNF501	Q96CX3	271 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	C10orf35	Q96D05	121 aa		13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	ELOVL5	Q9NYP7	299 aa		13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	RPL31	P62899	125 aa	Known RBP	13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	IGFBP7	Q16270	282 aa		13.3	□□□□□ -0.28
SYNRG-223	ENST00000616179	COA6	Q5JTJ3	125 aa	Known RBP	13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	TRAT1	Q6PIZ9	186 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	ZNF114	Q8NC26	417 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	RASL10B	Q96S79	203 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	LRFN3	Q9BTN0	628 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	GNG12	Q9UBI6	72 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	RPL24	P83731	157 aa	Known RBP	13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	ANKRD37	Q7Z713	158 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	NPCDR1	Q9BY65	106 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	DEPP	Q9NTK1	212 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	ABCA1	O95477	2261 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	APCS	P02743	223 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179		P04436	131 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	PQLC2	Q6ZP29	291 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	KMT5C	Q86Y97	462 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	KRTCAP3	Q53RY4	240 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	OR5A2	Q8NGI9	324 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	PCED1A	Q9H1Q7	454 aa		13.29	□□□□□ -0.28
SYNRG-223	ENST00000616179	HELT	A6NFD8	242 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	NKX6-3	A6NJ46	265 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	CSN3	P07498	182 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	PSG5	Q15238	335 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179		Q6ZS52	159 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	C1orf174	Q8IYL3	243 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	OR2T6	Q8NHC8	308 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	HS3ST6	Q96QI5	342 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	HYPM	O75409	117 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	CD1B	P29016	333 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	MFAP2	P55001	183 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	DTX1	Q86Y01	620 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	ODAM	A1E959	279 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	LINC01565	O15544	149 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	PSG1	P11464	419 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	TDGF1	P13385	188 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	UBE2N	P61088	152 aa	Known RBP	13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179	TPTE2P1	Q5T6R2	138 aa		13.28	□□□□□ -0.28
SYNRG-223	ENST00000616179		A0A1W2PRS3	328 aa		13.27	□□□□□ -0.28
SYNRG-223	ENST00000616179	GJE1	A6NN92	205 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	GDF1	P27539	372 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	FAM27B	Q5VT28	67 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	WDR73	Q6P4I2	378 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	NUDT11	Q96G61	164 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	RNASE7	Q9H1E1	156 aa	Known RBP	13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	ABCA7	Q8IZY2	2146 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	CELA2A	P08217	269 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	SELENOT	P62341	195 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	TCFL5	Q9UL49	500 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	RNF115	Q9Y4L5	304 aa		13.27	□□□□□ -0.29
SYNRG-223	ENST00000616179	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	FCGR3B	O75015	233 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	OR10J4	P0C629	311 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	CRYBB3	P26998	211 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	AMMECR1L	Q6DCA0	310 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	TPRX1	Q8N7U7	411 aa		13.26	□□□□□ -0.29
SYNRG-223	ENST00000616179	OR2D3	Q8NGH3	330 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms