RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 NEIL1Q96FI4 390 aaPredicted RBP7.32□□□□□ -1.24
CCDC47-207ENST00000612558 ARL6Q9H0F7 186 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 HEXA-AS1Q9H8Q6 139 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 FAM208BQ5VWN6 2430 aa7.32□□□□□ -1.24
CCDC47-207ENST00000612558 A0A1B0GU03 582 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 A0A1W2PPH5 198 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 RNF222A6NCQ9 220 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 LINC00473A8K010 186 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 M0R1X1 148 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 ST8SIA3O43173 380 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 DEDDO75618 318 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 ATG12O94817 140 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 SCGB1D2O95969 90 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 DUTP33316 252 aaKnown RBP7.31□□□□□ -1.24
CCDC47-207ENST00000612558 DLX6P56179 175 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 UTF1Q5T230 341 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 WDR25Q64LD2 544 aaPredicted RBP7.31□□□□□ -1.24
CCDC47-207ENST00000612558 FOXRED2Q8IWF2 684 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 KCNRGQ8N5I3 272 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 OR1S1Q8NH92 325 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 RNASE11Q8TAA1 199 aaKnown RBP7.31□□□□□ -1.24
CCDC47-207ENST00000612558 GPR146Q96CH1 333 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 RRNAD1Q96FB5 475 aaKnown RBP7.31□□□□□ -1.24
CCDC47-207ENST00000612558 OR5AC2Q9NZP5 309 aa7.31□□□□□ -1.24
CCDC47-207ENST00000612558 LSM5Q9Y4Y9 91 aaKnown RBP7.31□□□□□ -1.24
CCDC47-207ENST00000612558 SAA2-SAA4A0A096LPE2 208 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 A0A1W2PPE3 182 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 C17orf98A8MV24 154 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 K7EPK0 472 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 RAMP3O60896 148 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 NDUFS7O75251 213 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 IGKV1-5P01602 117 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 SAA2P0DJI9 122 aaPredicted RBP7.3□□□□□ -1.24
CCDC47-207ENST00000612558 KIR2DS2P43631 304 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 NKX2-1P43699 371 aaPredicted RBP7.3□□□□□ -1.24
CCDC47-207ENST00000612558 GPR6P46095 362 aaPredicted RBP7.3□□□□□ -1.24
CCDC47-207ENST00000612558 GNG10P50151 68 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 AKR1C2P52895 323 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 BRWD1-AS2P59051 145 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 ERVFRD-1P60508 538 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 SRSF1Q07955 248 aaKnown RBP eCLIP7.3□□□□□ -1.24
CCDC47-207ENST00000612558 RPL39P5Q59GN2 51 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 NCR3LG1Q68D85 454 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 TEX261Q6UWH6 196 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF767PQ75MW2 155 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 FAM219AQ8IW50 185 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 ODF3L1Q8IXM7 274 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 LYG1Q8N1E2 194 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 FAM71E2Q8N5Q1 922 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 C8orf31Q8N9H6 132 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 OR8H1Q8NGG4 311 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 C8orf46Q8TAG6 207 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 IGFBPL1Q8WX77 278 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 S1PR3Q99500 378 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 PATZ1Q9HBE1 687 aaKnown RBP7.3□□□□□ -1.24
CCDC47-207ENST00000612558 PRELID3BQ9Y3B1 194 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 POMT1Q9Y6A1 747 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 U3KQ87 197 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 COL12A1Q99715 3063 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 LRRK2Q5S007 2527 aa7.3□□□□□ -1.24
CCDC47-207ENST00000612558 A0A087X0M5 115 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 PPIAL4CA0A0B4J2A2 164 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 A0A0G2JRQ6 117 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 A0A1B0GX30 115 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 KANTRA0A1W2PQU2 76 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 E5RGE8 158 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 RBFOX2O43251 390 aaKnown RBP eCLIP7.29□□□□□ -1.24
CCDC47-207ENST00000612558 PITX3O75364 302 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 PPIAL4GP0DN37 164 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 IGHV1-8P0DP01 117 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 EPHA1P21709 976 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 GNB2P62879 340 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 ID3Q02535 119 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF816Q0VGE8 651 aaPredicted RBP7.29□□□□□ -1.24
CCDC47-207ENST00000612558 OR2B11Q5JQS5 317 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 SLC51BQ86UW2 128 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 C11orf42Q8N5U0 333 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 LINC00311Q8N616 119 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF596Q8TC21 504 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 ADTRPQ96IZ2 230 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 AQP10Q96PS8 301 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 ZNF251Q9BRH9 671 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 NSG2Q9Y328 171 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 MMP24Q9Y5R2 645 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 SPG11Q96JI7 2443 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 hCG_1809904A0A1W2PP81 198 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 A0A1W2PPE2 198 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 A0A1W2PR64 198 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 A0A1W2PRV1 198 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 F5H0A9 414 aaPredicted RBP7.29□□□□□ -1.24
CCDC47-207ENST00000612558 J3QR06 171 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 KCNAB3O43448 404 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 BCL2L11O43521 198 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 FCGR3BO75015 233 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 HPRT1P00492 218 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 KRASP01116 189 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 IFNA7P01567 189 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 RBP4P02753 201 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 COX6B1P14854 86 aa7.29□□□□□ -1.24
CCDC47-207ENST00000612558 PVALBP20472 110 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms