RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 PSG5Q15238 335 aa13.15□□□□□ -0.3
SSBP4-213ENST00000602088 OR51J1Q9H342 316 aa13.15□□□□□ -0.3
SSBP4-213ENST00000602088 SLC35D1Q9NTN3 355 aa13.15□□□□□ -0.3
SSBP4-213ENST00000602088 IGHV7-81A0A0B4J1V7 117 aa13.14□□□□□ -0.31
SSBP4-213ENST00000602088 IGKV1D-13A0A0B4J2D9 117 aa13.14□□□□□ -0.31
SSBP4-213ENST00000602088 MEIS3P1A6NDR6 274 aa13.14□□□□□ -0.31
SSBP4-213ENST00000602088 SLC22A5O76082 557 aa13.14□□□□□ -0.31
SSBP4-213ENST00000602088 IGKV1-13P0DP09 117 aa13.14□□□□□ -0.31
SSBP4-213ENST00000602088 DUTP33316 252 aaKnown RBP13.14□□□□□ -0.31
SSBP4-213ENST00000602088 CFHR3Q02985 330 aa13.14□□□□□ -0.31
SSBP4-213ENST00000602088 TEX38Q6PEX7 206 aa13.14□□□□□ -0.31
SSBP4-213ENST00000602088 ZNF645Q8N7E2 425 aa13.14□□□□□ -0.31
SSBP4-213ENST00000602088 SNAPC3Q92966 411 aa13.14□□□□□ -0.31
SSBP4-213ENST00000602088 FLYWCH2Q96CP2 140 aaKnown RBP13.14□□□□□ -0.31
SSBP4-213ENST00000602088 TSNAXQ99598 290 aaKnown RBP13.14□□□□□ -0.31
SSBP4-213ENST00000602088 PLXNB1O43157 2135 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 FCN1O00602 326 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 HPGDSO60760 199 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 FCER2P06734 321 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 ZNF182P17025 639 aaPredicted RBP13.13□□□□□ -0.31
SSBP4-213ENST00000602088 ELK1P19419 428 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 PRSS3P35030 304 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 PLGLAQ15195 96 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 MZT2AQ6P582 158 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 BVESQ8NE79 360 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 OR5AP2Q8NGF4 316 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 DDB2Q92466 427 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 ADTRPQ96IZ2 230 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 ZFP57Q9NU63 452 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 NECAP2Q9NVZ3 263 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 METTL1Q9UBP6 276 aaKnown RBP13.13□□□□□ -0.31
SSBP4-213ENST00000602088 ANAPC10Q9UM13 185 aa13.13□□□□□ -0.31
SSBP4-213ENST00000602088 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 LINC00473A8K010 186 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 ATP6V0E1O15342 81 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 SPDEFO95238 335 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 IGLV2-14P01704 120 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 IGHG4P01861 327 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 OR5H8P0DN80 308 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 RRASP10301 218 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 VDAC1P21796 283 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 PPIFP30405 207 aaKnown RBP13.12□□□□□ -0.31
SSBP4-213ENST00000602088 FCGR2CP31995 323 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 LGALS7P47929 136 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 RPL23AP62750 156 aaKnown RBP13.12□□□□□ -0.31
SSBP4-213ENST00000602088 CX3CL1P78423 397 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 TMEM177Q53S58 311 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 ZNF660Q6AZW8 331 aaPredicted RBP13.12□□□□□ -0.31
SSBP4-213ENST00000602088 CLVS1Q8IUQ0 354 aaPredicted RBP13.12□□□□□ -0.31
SSBP4-213ENST00000602088 RNF152Q8N8N0 203 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 IFT46Q9NQC8 304 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 PARP11Q9NR21 331 aa13.12□□□□□ -0.31
SSBP4-213ENST00000602088 IGLV2-23P01705 113 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 ELANEP08246 267 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 PF4V1P10720 104 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 AADACP22760 399 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 RPL5P46777 297 aaKnown RBP13.11□□□□□ -0.31
SSBP4-213ENST00000602088 NDPQ00604 133 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 CBX3Q13185 183 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 FOXE3Q13461 319 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 SPCS2Q15005 226 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 CDK10Q15131 360 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 RTL8BQ17RB0 113 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 RAB2BQ8WUD1 216 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 AP3S1Q92572 193 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 CLCC1Q96S66 551 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 MRPS7Q9Y2R9 242 aaKnown RBP13.11□□□□□ -0.31
SSBP4-213ENST00000602088 RBMX2Q9Y388 322 aaKnown RBP13.11□□□□□ -0.31
SSBP4-213ENST00000602088 FBXO7Q9Y3I1 522 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 WSB1Q9Y6I7 421 aa13.11□□□□□ -0.31
SSBP4-213ENST00000602088 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 G3V318 75 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 SLC25A17O43808 307 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 RPLP1P05386 114 aaKnown RBP13.1□□□□□ -0.31
SSBP4-213ENST00000602088 CRYGBP07316 175 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 NAT1P18440 290 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 CRIP2P52943 208 aaPredicted RBP13.1□□□□□ -0.31
SSBP4-213ENST00000602088 TMBIM6P55061 237 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 CXorf66Q5JRM2 361 aaPredicted RBP13.1□□□□□ -0.31
SSBP4-213ENST00000602088 ZNF562Q6V9R5 426 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 LCNL1Q6ZST4 164 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 GPX8Q8TED1 209 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 GIMAP1Q8WWP7 306 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 BCL7BQ9BQE9 202 aa13.1□□□□□ -0.31
SSBP4-213ENST00000602088 TRAV41A0A0B4J266 112 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 SRRM4A7MD48 611 aaKnown RBP13.09□□□□□ -0.31
SSBP4-213ENST00000602088 SHOXO15266 292 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 CA2P00918 260 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 PPYP01298 95 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 EGR2P11161 476 aaPredicted RBP13.09□□□□□ -0.31
SSBP4-213ENST00000602088 PSMB8P28062 276 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 SLC6A1P30531 599 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 RFX2P48378 723 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 RPL30P62888 115 aaKnown RBP13.09□□□□□ -0.31
SSBP4-213ENST00000602088 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
SSBP4-213ENST00000602088 C19orf54Q5BKX5 351 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 C18orf65Q6ZTR6 163 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 OVCH2Q7RTZ1 564 aa13.09□□□□□ -0.31
SSBP4-213ENST00000602088 PPP1R27Q86WC6 154 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms