RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 HLA-DRB3P79483 266 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 AKIRIN2Q53H80 203 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 CASC10Q5T4H9 136 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 PYHIN1Q6K0P9 492 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 ZNF562Q6V9R5 426 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 HAPLN4Q86UW8 402 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 ZNF383Q8NA42 475 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 OR56B1Q8NGI3 324 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 OR6Q1Q8NGQ2 317 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 FAM3DQ96BQ1 224 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 GFI1Q99684 422 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 RNF5Q99942 180 aa12.53□□□□□ -0.4
MBD3-206ENST00000589901 TENM2Q9NT68 2774 aa12.52□□□□□ -0.4
MBD3-206ENST00000589901 SACSQ9NZJ4 4579 aa12.52□□□□□ -0.4
MBD3-206ENST00000589901 TRAV1-2A0A0B4J238 106 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 TRDV1A0A1B0GX56 115 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 FOXI3A8MTJ6 420 aaPredicted RBP12.52□□□□□ -0.41
MBD3-206ENST00000589901 OR8U9P0C7N5 309 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 RAB3BP20337 219 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 GADD45AP24522 165 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 TMEM50BP56557 158 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 PITPNAQ00169 270 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 SPARTQ8N0X7 666 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 FAM89BQ8N5H3 189 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 EDARADDQ8WWZ3 215 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 RHOVQ96L33 236 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 OR4C12Q96R67 309 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 Q9N2K0 584 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 VCX3AQ9NNX9 186 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 SSR3Q9UNL2 185 aa12.52□□□□□ -0.41
MBD3-206ENST00000589901 IGKV1-6A0A0C4DH72 117 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 METTL21EPA6NDL7 271 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 TFAP2AP05549 437 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 RPS16P62249 146 aaKnown RBP12.51□□□□□ -0.41
MBD3-206ENST00000589901 SRSF7Q16629 238 aaKnown RBP eCLIP12.51□□□□□ -0.41
MBD3-206ENST00000589901 HES5Q5TA89 166 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 UBE2UQ5VVX9 321 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 ZNF773Q6PK81 442 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 GRPEL2Q8TAA5 225 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 PTX4Q96A99 478 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 FLYWCH2Q96CP2 140 aaKnown RBP12.51□□□□□ -0.41
MBD3-206ENST00000589901 ARHGAP5-AS1Q96IT6 56 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 SLA2Q9H6Q3 261 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 C12orf4Q9NQ89 552 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 RAB22AQ9UL26 194 aa12.51□□□□□ -0.41
MBD3-206ENST00000589901 ARPC1BO15143 372 aaKnown RBP12.5□□□□□ -0.41
MBD3-206ENST00000589901 SLC25A17O43808 307 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 TRGV3P03979 118 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 CD40LGP29965 261 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 VEGFCP49767 419 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 CLDN12P56749 244 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 SSBP2P81877 361 aaPredicted RBP12.5□□□□□ -0.41
MBD3-206ENST00000589901 FXYD3Q14802 87 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 SSX1Q16384 188 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 C2orf76Q3KRA6 126 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 C22orf42Q6IC83 251 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 TSNAXQ99598 290 aaKnown RBP12.5□□□□□ -0.41
MBD3-206ENST00000589901 PECRQ9BY49 303 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 ZNF221Q9UK13 617 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 HSF4Q9ULV5 492 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 STUB1Q9UNE7 303 aa12.5□□□□□ -0.41
MBD3-206ENST00000589901 IFITM5A6NNB3 132 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 SPDEFO95238 335 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 PJVKQ0ZLH3 352 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 ARL6IP1Q15041 203 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 PLAC9Q5JTB6 97 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 OR5T1Q8NG75 326 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 CMSS1Q9BQ75 279 aaKnown RBP12.49□□□□□ -0.41
MBD3-206ENST00000589901 CENPOQ9BU64 300 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 RSRP1Q9BUV0 290 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 ZNF355PQ9NSJ1 428 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 RDH8Q9NYR8 311 aa12.49□□□□□ -0.41
MBD3-206ENST00000589901 M0R1X1 148 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 APOA2P02652 100 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 CD3GP09693 182 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 PLA2G7Q13093 441 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 PDPNQ86YL7 162 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 Q8N1Y9 231 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 POC5Q8NA72 575 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 RAB3CQ96E17 227 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 ELOVL1Q9BW60 279 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 ZMAT4Q9H898 229 aa12.48□□□□□ -0.41
MBD3-206ENST00000589901 GAR1Q9NY12 217 aaKnown RBP12.48□□□□□ -0.41
MBD3-206ENST00000589901 ANKRD34BA5PLL1 514 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 TRDCB7Z8K6 153 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 IGLV1-51P01701 117 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 IGLV2-23P01705 113 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 IGHV4-30-4P0DP06 118 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 LYL1P12980 280 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 RAB6AP20340 208 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 TALDO1P37837 337 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 KCTD21Q4G0X4 260 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 RANGRFQ9HD47 186 aaPredicted RBP12.47□□□□□ -0.41
MBD3-206ENST00000589901 SLC35D1Q9NTN3 355 aa12.47□□□□□ -0.41
MBD3-206ENST00000589901 TMEM272A0A1B0GTI8 110 aa12.46□□□□□ -0.41
MBD3-206ENST00000589901 C13orf42A0A1B0GVH6 325 aa12.46□□□□□ -0.41
MBD3-206ENST00000589901 SCGNO76038 276 aa12.46□□□□□ -0.41
MBD3-206ENST00000589901 CNIH1O95406 144 aa12.46□□□□□ -0.41
MBD3-206ENST00000589901 CRYGBP07316 175 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms