RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 DEFB121Q5J5C9 76 aa14□□□□□ -0.17
SRSF1-208ENST00000584773 ZNF660Q6AZW8 331 aaPredicted RBP14□□□□□ -0.17
SRSF1-208ENST00000584773 OR10J5Q8NHC4 309 aa14□□□□□ -0.17
SRSF1-208ENST00000584773 LGALS14Q8TCE9 139 aa14□□□□□ -0.17
SRSF1-208ENST00000584773 DPF1Q92782 380 aa14□□□□□ -0.17
SRSF1-208ENST00000584773 CHCHD6Q9BRQ6 235 aa14□□□□□ -0.17
SRSF1-208ENST00000584773 MCRIP2Q9BUT9 160 aaKnown RBP14□□□□□ -0.17
SRSF1-208ENST00000584773 YTHDF1Q9BYJ9 559 aaKnown RBP14□□□□□ -0.17
SRSF1-208ENST00000584773 GHITMQ9H3K2 345 aa14□□□□□ -0.17
SRSF1-208ENST00000584773 SLC35D1Q9NTN3 355 aa14□□□□□ -0.17
SRSF1-208ENST00000584773 SSR3Q9UNL2 185 aa14□□□□□ -0.17
SRSF1-208ENST00000584773 RRP15Q9Y3B9 282 aaKnown RBP14□□□□□ -0.17
SRSF1-208ENST00000584773 I3L521 148 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 J3QRK9 145 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 SLC25A17O43808 307 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 RBBP9O75884 186 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 SDC2P34741 201 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 SERPINB10P48595 397 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 CDNFQ49AH0 187 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 SFXN4Q6P4A7 337 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 OR5M8Q8NGP6 311 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 NUDCD2Q8WVJ2 157 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 UBE2E2Q96LR5 201 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 GPR61Q9BZJ8 451 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 VSIG4Q9Y279 399 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 NUBP2Q9Y5Y2 271 aa13.99□□□□□ -0.17
SRSF1-208ENST00000584773 LOC100506127A0A0U1RQW1 187 aa13.98□□□□□ -0.17
SRSF1-208ENST00000584773 TMEM235A6NFC5 223 aa13.98□□□□□ -0.17
SRSF1-208ENST00000584773 ARPC1BO15143 372 aaKnown RBP13.98□□□□□ -0.17
SRSF1-208ENST00000584773 APOA2P02652 100 aa13.98□□□□□ -0.17
SRSF1-208ENST00000584773 TALDO1P37837 337 aa13.98□□□□□ -0.17
SRSF1-208ENST00000584773 CRIP2P52943 208 aaPredicted RBP13.98□□□□□ -0.17
SRSF1-208ENST00000584773 PPP1R27Q86WC6 154 aa13.98□□□□□ -0.17
SRSF1-208ENST00000584773 PDPNQ86YL7 162 aa13.98□□□□□ -0.17
SRSF1-208ENST00000584773 GINS4Q9BRT9 223 aa13.98□□□□□ -0.17
SRSF1-208ENST00000584773 FOXA2Q9Y261 457 aaPredicted RBP13.98□□□□□ -0.17
SRSF1-208ENST00000584773 IGLV2-23P01705 113 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 SSBP2P81877 361 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-208ENST00000584773 PJVKQ0ZLH3 352 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 UNQ5815/PRO19632Q6UWF5 114 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 H1FOOQ8IZA3 346 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-208ENST00000584773 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-208ENST00000584773 BVESQ8NE79 360 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 LFNGQ8NES3 379 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 OR1N2Q8NGR9 330 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 OR5H6Q8NGV6 325 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 GRPEL2Q8TAA5 225 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 FLYWCH2Q96CP2 140 aaKnown RBP13.97□□□□□ -0.17
SRSF1-208ENST00000584773 MS4A10Q96PG2 267 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 TSNAXQ99598 290 aaKnown RBP13.97□□□□□ -0.17
SRSF1-208ENST00000584773 RNF5Q99942 180 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 CENPOQ9BU64 300 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 ST6GALNAC5Q9BVH7 336 aa13.97□□□□□ -0.17
SRSF1-208ENST00000584773 RBM7Q9Y580 266 aaKnown RBP13.97□□□□□ -0.17
SRSF1-208ENST00000584773 SEC14L6B5MCN3 397 aa13.96□□□□□ -0.17
SRSF1-208ENST00000584773 IGHV3-11P01762 117 aa13.96□□□□□ -0.17
SRSF1-208ENST00000584773 TGFBR1P36897 503 aa13.96□□□□□ -0.17
SRSF1-208ENST00000584773 HACD4Q5VWC8 232 aa13.96□□□□□ -0.17
SRSF1-208ENST00000584773 TPRA1Q86W33 373 aa13.96□□□□□ -0.17
SRSF1-208ENST00000584773 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.96□□□□□ -0.17
SRSF1-208ENST00000584773 SCOCQ9UIL1 159 aa13.96□□□□□ -0.17
SRSF1-208ENST00000584773 SRRM4A7MD48 611 aaKnown RBP13.95□□□□□ -0.18
SRSF1-208ENST00000584773 SSX5O60225 188 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 SPDEFO95238 335 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 CD36P16671 472 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 DTYMKP23919 212 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 SLURP1P55000 103 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 DGCR2P98153 550 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 RUNX1Q01196 453 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 ZNF616Q08AN1 781 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 FXYD3Q14802 87 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 ZNF260Q3ZCT1 412 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 ACTBL2Q562R1 376 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 C9orf66Q5T8R8 295 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 C11orf87Q6NUJ2 197 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 ZNF562Q6V9R5 426 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 Q6ZS49 121 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 ARPC1AQ92747 370 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 HARBI1Q96MB7 349 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 PRR25Q96S07 402 aa13.95□□□□□ -0.18
SRSF1-208ENST00000584773 LINC00473A8K010 186 aa13.94□□□□□ -0.18
SRSF1-208ENST00000584773 CRYGBP07316 175 aa13.94□□□□□ -0.18
SRSF1-208ENST00000584773 NFYAP23511 347 aaPredicted RBP13.94□□□□□ -0.18
SRSF1-208ENST00000584773 DEFA5Q01523 94 aa13.94□□□□□ -0.18
SRSF1-208ENST00000584773 SRSF7Q16629 238 aaKnown RBP eCLIP13.94□□□□□ -0.18
SRSF1-208ENST00000584773 IDNKQ5T6J7 187 aa13.94□□□□□ -0.18
SRSF1-208ENST00000584773 DCUN1D4Q92564 292 aa13.94□□□□□ -0.18
SRSF1-208ENST00000584773 SLC25A38Q96DW6 304 aa13.94□□□□□ -0.18
SRSF1-208ENST00000584773 RHBDL2Q9NX52 303 aa13.94□□□□□ -0.18
SRSF1-208ENST00000584773 COL7A1Q02388 2944 aa13.94□□□□□ -0.18
SRSF1-208ENST00000584773 IGHV4OR15-8A0A075B7B6 117 aa13.93□□□□□ -0.18
SRSF1-208ENST00000584773 A0A087WW49 117 aa13.93□□□□□ -0.18
SRSF1-208ENST00000584773 DIRAS3O95661 229 aa13.93□□□□□ -0.18
SRSF1-208ENST00000584773 OR8U8P0C7N1 319 aa13.93□□□□□ -0.18
SRSF1-208ENST00000584773 DUTP33316 252 aaKnown RBP13.93□□□□□ -0.18
SRSF1-208ENST00000584773 ECI1P42126 302 aa13.93□□□□□ -0.18
SRSF1-208ENST00000584773 TPPP2P59282 170 aa13.93□□□□□ -0.18
SRSF1-208ENST00000584773 MRGPRG-AS1Q2M3A8 158 aa13.93□□□□□ -0.18
SRSF1-208ENST00000584773 KCTD21Q4G0X4 260 aa13.93□□□□□ -0.18
SRSF1-208ENST00000584773 DDB2Q92466 427 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms