RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 FAM90A2PQ658T7 463 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 LRCOL1A6NCL2 159 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 H7C2Y5 167 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 SELENOWP63302 87 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 BCDIN3DQ7Z5W3 292 aaKnown RBP4.05□□□□□ -1.76
CCDC178-209ENST00000579947 SLC25A42Q86VD7 318 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 FUNDC1Q8IVP5 155 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 ELMOD2Q8IZ81 293 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 Q8N814 137 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 TPD52L3Q96J77 140 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 C16orf92Q96LL3 132 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 LINC01600Q96MT4 127 aa4.05□□□□□ -1.76
CCDC178-209ENST00000579947 TRBV7-1A0A0A6YYK4 115 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 ARPC2O15144 300 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 UBDO15205 165 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 PROP1O75360 226 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 APELAP0DMC3 54 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 SLC1A6P48664 564 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 MTCP1P56278 107 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 CCDC54Q8NEL0 328 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 C10orf35Q96D05 121 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 CHAC1Q9BUX1 264 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 DPCDQ9BVM2 203 aaPredicted RBP4.04□□□□□ -1.76
CCDC178-209ENST00000579947 SLC35D1Q9NTN3 355 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 AP5S1Q9NUS5 200 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 ING4Q9UNL4 249 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 ZNF257Q9Y2Q1 563 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 TNFRSF18Q9Y5U5 241 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 MPPED1O15442 326 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 ZNF254O75437 659 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 GNB3P16520 340 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 PRKACBP22694 351 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 FGF9P31371 208 aaPredicted RBP4.04□□□□□ -1.76
CCDC178-209ENST00000579947 CDKN1BP46527 198 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 ESRGQ1W209 222 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 ACOT6Q3I5F7 207 aaPredicted RBP4.04□□□□□ -1.76
CCDC178-209ENST00000579947 GLDNQ6ZMI3 551 aaPredicted RBP4.04□□□□□ -1.76
CCDC178-209ENST00000579947 OR10A6Q8NH74 314 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 RNF2Q99496 336 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 SMPXQ9UHP9 88 aa4.04□□□□□ -1.76
CCDC178-209ENST00000579947 IGHV3OR16-8A0A075B7F1 116 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 SERPINA3P01011 423 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 HBZP02008 142 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 H1F0P07305 194 aaKnown RBP4.03□□□□□ -1.76
CCDC178-209ENST00000579947 PAFAH1B2P68402 229 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 MICAQ29983 383 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 FAM98BQ52LJ0 330 aaKnown RBP4.03□□□□□ -1.76
CCDC178-209ENST00000579947 BCL2L15Q5TBC7 163 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 ELP2Q6IA86 826 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 TRAT1Q6PIZ9 186 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 NKAIN3Q8N8D7 197 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 CGREF1Q99674 301 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 IFI27L2Q9H2X8 130 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 GMPR2Q9P2T1 348 aaKnown RBP4.03□□□□□ -1.76
CCDC178-209ENST00000579947 JPT1Q9UK76 154 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 PGPEP1LA6NFU8 196 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 SPAG7O75391 227 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 CRYGCP07315 174 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 SF3A3Q12874 501 aaKnown RBP eCLIP4.03□□□□□ -1.76
CCDC178-209ENST00000579947 C6orf183Q5T699 404 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 RPL13AP3Q6NVV1 102 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 SSX9Q7RTT3 188 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 PDPNQ86YL7 162 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 SUMF2Q8NBJ7 301 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 CCDC107Q8WV48 283 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 PAXXQ9BUH6 204 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 PIPOXQ9P0Z9 390 aa4.03□□□□□ -1.76
CCDC178-209ENST00000579947 TRBV4-1A0A0J9YWV2 114 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 CHEK1O14757 476 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 YPEL1O60688 119 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 MT-ND4P03905 459 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 ATF1P18846 271 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 ALOX5APP20292 161 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 RAB6AP20340 208 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 GSSP48637 474 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 GNMTQ14749 295 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 ERICH5Q6P6B1 374 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 MFSD4AQ8N468 514 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 CIRBP-AS1Q8TBR5 109 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 SRSF12Q8WXF0 261 aaKnown RBP4.02□□□□□ -1.77
CCDC178-209ENST00000579947 PP6455Q8WZ26 134 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 PPP1R14BQ96C90 147 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 CMTM3Q96MX0 182 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 YPEL2Q96QA6 119 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 YTHDF2Q9Y5A9 579 aaKnown RBP4.02□□□□□ -1.77
CCDC178-209ENST00000579947 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 IGKV1-9A0A0C4DH69 117 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 LINC00473A8K010 186 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 F5H768 121 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 SELENOFO60613 162 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 CLEC3BP05452 202 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 CD5P06127 495 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 KDELR2P33947 212 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 KRTAP10-8P60410 259 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 ROM1Q03395 351 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 SPSB1Q96BD6 273 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 C7orf26Q96N11 449 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 DNAJC4Q9NNZ3 241 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 ST3GAL6Q9Y274 331 aa4.02□□□□□ -1.77
CCDC178-209ENST00000579947 AIPO00170 330 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms