RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PHLDA1Q8WV24 401 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-208ENST00000573716 CACNG8Q8WXS5 425 aa9.12□□□□□ -0.95
PRPF8-208ENST00000573716 TMEM68Q96MH6 324 aa9.12□□□□□ -0.95
PRPF8-208ENST00000573716 OR14A2Q96R54 314 aa9.12□□□□□ -0.95
PRPF8-208ENST00000573716 C11orf54Q9H0W9 315 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-208ENST00000573716 AKIP1Q9NQ31 210 aa9.12□□□□□ -0.95
PRPF8-208ENST00000573716 ZC4H2Q9NQZ6 224 aa9.12□□□□□ -0.95
PRPF8-208ENST00000573716 SLC35D1Q9NTN3 355 aa9.12□□□□□ -0.95
PRPF8-208ENST00000573716 TECRQ9NZ01 308 aaKnown RBP9.12□□□□□ -0.95
PRPF8-208ENST00000573716 OR1A1Q9P1Q5 309 aa9.12□□□□□ -0.95
PRPF8-208ENST00000573716 ZNF221Q9UK13 617 aa9.12□□□□□ -0.95
PRPF8-208ENST00000573716 MSGN1A6NI15 193 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 M0R1X1 148 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 OR9G9P0C7N8 305 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 LIMS3P0CW19 117 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 LIMS4P0CW20 117 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 BMI1P35226 326 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 CCDC58Q4VC31 144 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 C6orf201Q7Z4U5 140 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 TMEM61Q8N0U2 210 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 SVOPQ8N4V2 548 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 EDARADDQ8WWZ3 215 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 CENPNQ96H22 339 aaPredicted RBP9.11□□□□□ -0.95
PRPF8-208ENST00000573716 HARBI1Q96MB7 349 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 Q96MT0 163 aa9.11□□□□□ -0.95
PRPF8-208ENST00000573716 DNAH10Q8IVF4 4471 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 OR2C1O95371 312 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 IGLV2-23P01705 113 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-208ENST00000573716 TNXAQ16473 311 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 Q499Y3 187 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 OR2G6Q5TZ20 316 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 ZNF57Q68EA5 555 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-208ENST00000573716 TMPRSS11AQ6ZMR5 421 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 TMEM217Q8N7C4 229 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 ZFP41Q8N8Y5 198 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 ADAD2Q8NCV1 583 aaKnown RBP9.1□□□□□ -0.95
PRPF8-208ENST00000573716 KCNG3Q8TAE7 436 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 AGMATQ9BSE5 352 aa9.1□□□□□ -0.95
PRPF8-208ENST00000573716 ZNF230Q9UIE0 474 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-208ENST00000573716 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.09□□□□□ -0.95
PRPF8-208ENST00000573716 TRBV5-5A0A0J9YX44 114 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 ZNF320A2RRD8 509 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 FAM223BA6NKX1 122 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 EI24O14681 340 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 SHOXO15266 292 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 PROP1O75360 226 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 ALPLP05186 524 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 ZBTB25P24278 435 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 CAPGP40121 348 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 ETV1P50549 477 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 APOC4P55056 127 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 CBX3Q13185 183 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 ANKRD55Q3KP44 614 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 TM4SF20Q53R12 229 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 OR10K2Q6IF99 312 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 FAM223AQ8IWN6 122 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 ACOT12Q8WYK0 555 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 SLC7A6OSQ96CW6 309 aaPredicted RBP9.09□□□□□ -0.95
PRPF8-208ENST00000573716 SMIM19Q96E16 107 aa9.09□□□□□ -0.95
PRPF8-208ENST00000573716 RPL36Q9Y3U8 105 aaKnown RBP9.09□□□□□ -0.95
PRPF8-208ENST00000573716 PNMA8CA0A1B0GUJ8 204 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 ITGB1BP1O14713 200 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 GGCTO75223 188 aaKnown RBP9.08□□□□□ -0.96
PRPF8-208ENST00000573716 OR2J3O76001 311 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 CRYGBP07316 175 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 GABRB1P18505 474 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 CBLN1P23435 193 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 ZNF45Q02386 682 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 C1orf146Q5VVC0 180 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 Q6ZWC4 215 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 MOB1BQ7L9L4 216 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 WFDC3Q8IUB2 231 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 HDHD3Q9BSH5 251 aaPredicted RBP9.08□□□□□ -0.96
PRPF8-208ENST00000573716 FBXL17Q9UF56 701 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
PRPF8-208ENST00000573716 EXOSC1Q9Y3B2 195 aaKnown RBP9.08□□□□□ -0.96
PRPF8-208ENST00000573716 RYR1P21817 5038 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 OGG1O15527 345 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 NAPSAO96009 420 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 LALBAP00709 142 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 IGHV3-23P01764 117 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 HLA-DRB3P79483 266 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 C15orf32Q32M92 178 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 YIF1BQ5BJH7 314 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 BTNL8Q6UX41 500 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 IDO2Q6ZQW0 420 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 UXS1Q8NBZ7 420 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 SRSF12Q8WXF0 261 aaKnown RBP9.07□□□□□ -0.96
PRPF8-208ENST00000573716 BABAM2Q9NXR7 383 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 MLXQ9UH92 298 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 UBQLN2Q9UHD9 624 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 S4R3C0 116 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 KIAA1109Q2LD37 5005 aa9.07□□□□□ -0.96
PRPF8-208ENST00000573716 MUC4Q99102 2169 aa9.06□□□□□ -0.96
PRPF8-208ENST00000573716 TRBV5-7A0A0A0MS05 114 aa9.06□□□□□ -0.96
PRPF8-208ENST00000573716 SCTP09683 121 aa9.06□□□□□ -0.96
PRPF8-208ENST00000573716 RPL35AP18077 110 aaKnown RBP9.06□□□□□ -0.96
PRPF8-208ENST00000573716 HTR2CP28335 458 aa9.06□□□□□ -0.96
PRPF8-208ENST00000573716 RPS11P62280 158 aaKnown RBP eCLIP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms