RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 CENPVQ7Z7K6 275 aaPredicted RBP18.85■□□□□ 0.61
RCCD1-208ENST00000557266 RPP25LQ8N5L8 163 aaKnown RBP18.85■□□□□ 0.61
RCCD1-208ENST00000557266 DTD1Q8TEA8 209 aa18.85■□□□□ 0.61
RCCD1-208ENST00000557266 TAAR6Q96RI8 345 aa18.85■□□□□ 0.61
RCCD1-208ENST00000557266 PSG11Q9UQ72 335 aa18.85■□□□□ 0.61
RCCD1-208ENST00000557266 CACNA1DQ01668 2161 aa18.84■□□□□ 0.61
RCCD1-208ENST00000557266 RAB29O14966 203 aa18.84■□□□□ 0.61
RCCD1-208ENST00000557266 SMIM6P0DI80 62 aa18.84■□□□□ 0.61
RCCD1-208ENST00000557266 EGR1P18146 543 aa18.84■□□□□ 0.61
RCCD1-208ENST00000557266 MSMPQ1L6U9 139 aa18.84■□□□□ 0.61
RCCD1-208ENST00000557266 ZNF66Q6ZN08 573 aa18.84■□□□□ 0.61
RCCD1-208ENST00000557266 BHLHA15Q7RTS1 189 aaPredicted RBP18.84■□□□□ 0.61
RCCD1-208ENST00000557266 TCTEX1D1Q8N7M0 179 aa18.84■□□□□ 0.61
RCCD1-208ENST00000557266 PROCRQ9UNN8 238 aa18.84■□□□□ 0.61
RCCD1-208ENST00000557266 AHRRA9YTQ3 701 aa18.83■□□□□ 0.61
RCCD1-208ENST00000557266 PAX5Q02548 391 aa18.83■□□□□ 0.61
RCCD1-208ENST00000557266 DEFB109BQ30KR1 87 aa18.83■□□□□ 0.61
RCCD1-208ENST00000557266 ACSM6Q6P461 480 aa18.83■□□□□ 0.61
RCCD1-208ENST00000557266 BEND4Q6ZU67 534 aa18.83■□□□□ 0.61
RCCD1-208ENST00000557266 SEM1Q6ZVN7 128 aa18.83■□□□□ 0.61
RCCD1-208ENST00000557266 MRGPRGQ86SM5 289 aa18.83■□□□□ 0.61
RCCD1-208ENST00000557266 VAX2Q9UIW0 290 aa18.83■□□□□ 0.61
RCCD1-208ENST00000557266 ZNF737O75373 536 aa18.83■□□□□ 0.6
RCCD1-208ENST00000557266 PRDX2P32119 198 aa18.83■□□□□ 0.6
RCCD1-208ENST00000557266 EDDM3AQ14507 147 aa18.83■□□□□ 0.6
RCCD1-208ENST00000557266 SLC16A13Q7RTY0 426 aa18.83■□□□□ 0.6
RCCD1-208ENST00000557266 H2BFWTQ7Z2G1 175 aa18.83■□□□□ 0.6
RCCD1-208ENST00000557266 OR2Z1Q8NG97 314 aa18.83■□□□□ 0.6
RCCD1-208ENST00000557266 P2RX4Q99571 388 aa18.83■□□□□ 0.6
RCCD1-208ENST00000557266 TMEM147Q9BVK8 224 aa18.83■□□□□ 0.6
RCCD1-208ENST00000557266 B4DEV8 164 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 P2RY6Q15077 328 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 HSD17B10Q99714 261 aaKnown RBP18.82■□□□□ 0.6
RCCD1-208ENST00000557266 MRPL37Q9BZE1 423 aaKnown RBP18.82■□□□□ 0.6
RCCD1-208ENST00000557266 SLC25A15Q9Y619 301 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 TGIF2-C20orf24A0A0A6YYL0 155 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 CEBPZOSA8MTT3 80 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 SPINT2O43291 252 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 HTD2P86397 168 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 ATP6V1FQ16864 119 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 LTC4SQ16873 150 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 LHX4Q969G2 390 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 SLC39A9Q9NUM3 307 aa18.82■□□□□ 0.6
RCCD1-208ENST00000557266 IGKV1D-17A0A075B6S4 117 aa18.81■□□□□ 0.6
RCCD1-208ENST00000557266 RPS16P62249 146 aaKnown RBP18.81■□□□□ 0.6
RCCD1-208ENST00000557266 PNRC1Q12796 327 aaPredicted RBP18.81■□□□□ 0.6
RCCD1-208ENST00000557266 SPINK9Q5DT21 86 aa18.81■□□□□ 0.6
RCCD1-208ENST00000557266 LRP11Q86VZ4 500 aa18.81■□□□□ 0.6
RCCD1-208ENST00000557266 NANPQ8TBE9 248 aa18.81■□□□□ 0.6
RCCD1-208ENST00000557266 INTS1Q8N201 2190 aaKnown RBP18.81■□□□□ 0.6
RCCD1-208ENST00000557266 MARCH11A6NNE9 402 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 ADH4P08319 380 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 PMS2P11Q13670 270 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 TRAT1Q6PIZ9 186 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 OR10P1Q8NGE3 313 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 LAMP3Q9UQV4 416 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 CHD3Q12873 2000 aaKnown RBP18.8■□□□□ 0.6
RCCD1-208ENST00000557266 SRRM5B3KS81 715 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 IFNA1P01562 189 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 FGF7P21781 194 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 TFF3Q07654 80 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 KIAA0141Q14154 515 aaPredicted RBP18.8■□□□□ 0.6
RCCD1-208ENST00000557266 FAM169BQ8N8A8 192 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 CIB3Q96Q77 187 aaPredicted RBP18.8■□□□□ 0.6
RCCD1-208ENST00000557266 SDF2L1Q9HCN8 221 aa18.8■□□□□ 0.6
RCCD1-208ENST00000557266 PROP1O75360 226 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 RBMXL2O75526 392 aaKnown RBP18.79■□□□□ 0.6
RCCD1-208ENST00000557266 S100A12P80511 92 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 MZT1Q08AG7 82 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 NCR3LG1Q68D85 454 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 C1orf174Q8IYL3 243 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 SLC25A22Q9H936 323 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 CLN5O75503 358 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 S100A9P06702 114 aaKnown RBP18.79■□□□□ 0.6
RCCD1-208ENST00000557266 CD81P60033 236 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 ZNF674Q2M3X9 581 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 VWC2Q2TAL6 325 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 PLPPR2Q96GM1 343 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 TCEAL7Q9BRU2 100 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 DUSP13Q9UII6 198 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 DCHS1Q96JQ0 3298 aa18.79■□□□□ 0.6
RCCD1-208ENST00000557266 NBEAQ8NFP9 2946 aa18.78■□□□□ 0.6
RCCD1-208ENST00000557266 MBD3L4A6NDZ8 208 aaPredicted RBP18.78■□□□□ 0.6
RCCD1-208ENST00000557266 MBD3L3A6NE82 208 aaPredicted RBP18.78■□□□□ 0.6
RCCD1-208ENST00000557266 MBD3L5A6NJ08 208 aaPredicted RBP18.78■□□□□ 0.6
RCCD1-208ENST00000557266 HMGB3O15347 200 aaKnown RBP18.78■□□□□ 0.6
RCCD1-208ENST00000557266 CEACAM4O75871 244 aa18.78■□□□□ 0.6
RCCD1-208ENST00000557266 SPRNQ5BIV9 151 aa18.78■□□□□ 0.6
RCCD1-208ENST00000557266 NCMAPQ5T1S8 102 aa18.78■□□□□ 0.6
RCCD1-208ENST00000557266 MBD3L2Q8NHZ7 208 aaPredicted RBP18.78■□□□□ 0.6
RCCD1-208ENST00000557266 TMPRSS5Q9H3S3 457 aa18.78■□□□□ 0.6
RCCD1-208ENST00000557266 CYB5R3P00387 301 aaPredicted RBP18.77■□□□□ 0.6
RCCD1-208ENST00000557266 DUTP33316 252 aaKnown RBP18.77■□□□□ 0.6
RCCD1-208ENST00000557266 GPR12P47775 334 aa18.77■□□□□ 0.6
RCCD1-208ENST00000557266 RTP5Q14D33 572 aa18.77■□□□□ 0.6
RCCD1-208ENST00000557266 WDR25Q64LD2 544 aaPredicted RBP18.77■□□□□ 0.6
RCCD1-208ENST00000557266 R3HDM4Q96D70 268 aa18.77■□□□□ 0.6
RCCD1-208ENST00000557266 QTRT1Q9BXR0 403 aaKnown RBP18.77■□□□□ 0.6
RCCD1-208ENST00000557266 NPCDR1Q9BY65 106 aa18.77■□□□□ 0.6
RCCD1-208ENST00000557266 WASF3Q9UPY6 502 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms