RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 Q96MT0 163 aa4.5□□□□□ -1.69
TGFBR1-208ENST00000550253 LINC00052Q96N35 136 aa4.5□□□□□ -1.69
TGFBR1-208ENST00000550253 OR52B2Q96RD2 323 aa4.5□□□□□ -1.69
TGFBR1-208ENST00000550253 ATOH8Q96SQ7 321 aa4.5□□□□□ -1.69
TGFBR1-208ENST00000550253 DSN1Q9H410 356 aa4.5□□□□□ -1.69
TGFBR1-208ENST00000550253 POPDC3Q9HBV1 291 aa4.5□□□□□ -1.69
TGFBR1-208ENST00000550253 FLVCR2Q9UPI3 526 aa4.5□□□□□ -1.69
TGFBR1-208ENST00000550253 MOKQ9UQ07 419 aa4.5□□□□□ -1.69
TGFBR1-208ENST00000550253 PKD1L1Q8TDX9 2849 aa4.5□□□□□ -1.69
TGFBR1-208ENST00000550253 K7EP13 123 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 AIPO00170 330 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 GGCTO75223 188 aaKnown RBP4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 HSBP1O75506 76 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 GADD45GO95257 159 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 OXTP01178 125 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 LCN1P31025 176 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 PLCXD2Q0VAA5 305 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 AQP6Q13520 282 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 GABRA6Q16445 453 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 RNLSQ5VYX0 342 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 KDM4DQ6B0I6 523 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 LPCAT3Q6P1A2 487 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 ZNF283Q8N7M2 679 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 BPIFB6Q8NFQ5 453 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 OR52R1Q8NGF1 315 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 OR10R2Q8NGX6 335 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 ZNF681Q96N22 645 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 COL21A1Q96P44 957 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 TSSK3Q96PN8 268 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 EBF4Q9BQW3 602 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 ZNF436Q9C0F3 470 aaPredicted RBP4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 NXF2Q9GZY0 626 aaKnown RBP4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 NMNAT1Q9HAN9 279 aaPredicted RBP4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 AIG1Q9NVV5 245 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 POMPQ9Y244 141 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 TRAPPC4Q9Y296 219 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 HSPB11Q9Y547 144 aa4.49□□□□□ -1.69
TGFBR1-208ENST00000550253 CIB4A0PJX0 185 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 LYRM9A8MSI8 78 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 F6UB75 175 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 ARPC5O15511 151 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 GCM2O75603 506 aaPredicted RBP4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 GABARAPO95166 117 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 HBE1P02100 147 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 KLK1P06870 262 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 PVALBP20472 110 aaPredicted RBP4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 ARR3P36575 388 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 PPICP45877 212 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 OR3A4PP47883 348 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 RAB5CP51148 216 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 CAV1Q03135 178 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 TRAM1Q15629 374 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 SLC48A1Q6P1K1 146 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 BAIAP2L2Q6UXY1 529 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 RASSF6Q6ZTQ3 369 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 LINC00336Q6ZUF6 198 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 RPS27LQ71UM5 84 aaKnown RBP4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 CYP4Z1Q86W10 505 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 OR2M3Q8NG83 312 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 OR5J2Q8NH18 312 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 C16orf78Q8WTQ4 265 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 CACNG8Q8WXS5 425 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 AP3S1Q92572 193 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 GPR22Q99680 433 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 RBBP8Q99708 897 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 NKX6-2Q9C056 277 aaPredicted RBP4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 DCSTAMPQ9H295 470 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 TMEM38AQ9H6F2 299 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 CLN6Q9NWW5 311 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 OPTCQ9UBM4 332 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 Q9UF83 564 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 DKKL1Q9UK85 242 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 OR52A1Q9UKL2 312 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 POFUT2Q9Y2G5 429 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 FREM1Q5H8C1 2179 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 TRRAPQ9Y4A5 3859 aa4.48□□□□□ -1.69
TGFBR1-208ENST00000550253 MALRD1Q5VYJ5 2156 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 DPRXA6NFQ7 191 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 SMKR1H3BMG3 65 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 SS18L1O75177 396 aaPredicted RBP4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 REM1O75628 298 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 IFNA17P01571 189 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 TACSTD2P09758 323 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 NBEAP1P0C6P0 100 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 CT45A6P0DMU7 189 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 CT45A5P0DMU8 189 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 CT45A7P0DMV0 189 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 SPNP16150 400 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 HIST1H1BP16401 226 aaKnown RBP4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 ZNF25P17030 456 aaPredicted RBP4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 FMO3P31513 532 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 TGM4P49221 684 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 DSCR4P56555 118 aaPredicted RBP4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 GABARAPL2P60520 117 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 BSPH1Q075Z2 132 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 MADCAM1Q13477 382 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 ZNF726P1Q15940 193 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 GUK1Q16774 197 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 TMEM249Q2WGJ8 235 aa4.47□□□□□ -1.69
TGFBR1-208ENST00000550253 CT45A1Q5HYN5 189 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms