RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 BLOC1S6Q9UL45 172 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 KCNK7Q9Y2U2 307 aa11.12□□□□□ -0.63
COL2A1-209ENST00000546974 ERICH4A6NGS2 130 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 FABP7O15540 132 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 DIRAS3O95661 229 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 HSPA13P48723 471 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 SLURP1P55000 103 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 LINC00205P59089 165 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 SSX1Q16384 188 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 FLYWCH2Q96CP2 140 aaKnown RBP11.11□□□□□ -0.63
COL2A1-209ENST00000546974 RAB3CQ96E17 227 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 RHOVQ96L33 236 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 CABLES2Q9BTV7 478 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 SLA2Q9H6Q3 261 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 SLC35D1Q9NTN3 355 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 U3KQK5 164 aa11.11□□□□□ -0.63
COL2A1-209ENST00000546974 IGHV4OR15-8A0A075B7B6 117 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 A0A087WW49 117 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 TRBV6-7A0A0A0MS04 114 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 M0R1X1 148 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 ARPC1BO15143 372 aaKnown RBP11.1□□□□□ -0.63
COL2A1-209ENST00000546974 SAP30O75446 220 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 LY86O95711 162 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 HSPB1P04792 205 aaKnown RBP11.1□□□□□ -0.63
COL2A1-209ENST00000546974 FCGR3AP08637 254 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 RAB6AP20340 208 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 GADD45AP24522 165 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 FXYD3Q14802 87 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 MOGAT2Q3SYC2 334 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 OR10R2Q8NGX6 335 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 OR10J5Q8NHC4 309 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 ARPC1AQ92747 370 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 CNBD2Q96M20 576 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
COL2A1-209ENST00000546974 TNCP24821 2201 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 TRDV1A0A1B0GX56 115 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 SHISA3A0PJX4 238 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 IFITM5A6NNB3 132 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 RAB27BO00194 218 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 MFNGO00587 321 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 BET1O15155 118 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 SLC25A17O43808 307 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 IGHV3-11P01762 117 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 OR8U9P0C7N5 309 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 GSTT2P0CG29 244 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 GSTT2BP0CG30 244 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 SNRPBP14678 240 aaKnown RBP11.09□□□□□ -0.63
COL2A1-209ENST00000546974 GNB3P16520 340 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 MYL9P24844 172 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 LGALS7P47929 136 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 OR10A3P58181 314 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 TPPP2P59282 170 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 TAGLNQ01995 201 aaKnown RBP11.09□□□□□ -0.63
COL2A1-209ENST00000546974 SRSF7Q16629 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL2A1-209ENST00000546974 IGSF11Q5DX21 431 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 ACSM6Q6P461 480 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 IZUMO2Q6UXV1 221 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 MS4A10Q96PG2 267 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 CENPOQ9BU64 300 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 OR2D2Q9H210 308 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 NDUFB11Q9NX14 153 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 SDHAF2Q9NX18 166 aa11.09□□□□□ -0.63
COL2A1-209ENST00000546974 STAB2Q8WWQ8 2551 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 METTL21EPA6NDL7 271 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 H3BUA1 57 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 IGLV2-23P01705 113 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 TRGV3P03979 118 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 CRYGBP07316 175 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 HIST1H1DP16402 221 aaKnown RBP11.08□□□□□ -0.64
COL2A1-209ENST00000546974 RAB3BP20337 219 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 GALP22466 123 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 OR6Q1Q8NGQ2 317 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 GRPEL2Q8TAA5 225 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 TMEM68Q96MH6 324 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 ASCL2Q99929 193 aa11.08□□□□□ -0.64
COL2A1-209ENST00000546974 MRPS14O60783 128 aaKnown RBP11.07□□□□□ -0.64
COL2A1-209ENST00000546974 CNIH1O95406 144 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 RRASP10301 218 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 SPNP16150 400 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 SSBP2P81877 361 aaPredicted RBP11.07□□□□□ -0.64
COL2A1-209ENST00000546974 PITPNAQ00169 270 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 CBX3Q13185 183 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 ARL6IP1Q15041 203 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 TMEM177Q53S58 311 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 Q6ZS49 121 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 POC5Q8NA72 575 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 MAFIPQ8WZ33 124 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 HARBI1Q96MB7 349 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 ZNF230Q9UIE0 474 aaPredicted RBP11.07□□□□□ -0.64
COL2A1-209ENST00000546974 RAB26Q9ULW5 256 aa11.07□□□□□ -0.64
COL2A1-209ENST00000546974 DYNC2H1Q8NCM8 4307 aaKnown RBP11.06□□□□□ -0.64
COL2A1-209ENST00000546974 A0A075B6Q4 140 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 A0A0G2JLM5 398 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 SHOXO15266 292 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 BRI3O95415 125 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 GP9P14770 177 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 TALDO1P37837 337 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 GABARAPL2P60520 117 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 PJVKQ0ZLH3 352 aa11.06□□□□□ -0.64
COL2A1-209ENST00000546974 ARFRP1Q13795 201 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms