RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SERPINI1Q99574 410 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 APOL4Q9BPW4 351 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF2Q9BSG1 426 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-217ENST00000541578 NDFIP1Q9BT67 221 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 CHAC1Q9BUX1 264 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 TMED9Q9BVK6 235 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 ANGPTL4Q9BY76 406 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 DSN1Q9H410 356 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF331Q9NQX6 463 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF222Q9UK12 451 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 NEU3Q9UQ49 428 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 SNX24Q9Y343 169 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 ENPP4Q9Y6X5 453 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 URGCP-MRPS24S4R325 110 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 TNRC6AQ8NDV7 1962 aaKnown RBP2.83□□□□□ -1.96
SNHG1-217ENST00000541578 TET2Q6N021 2002 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-217ENST00000541578 NF1P21359 2839 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 COL27A1Q8IZC6 1860 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PCM1Q15154 2024 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 DCHS2Q6V1P9 2916 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 IGKV1-8A0A0C4DH67 115 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 CXorf51AA0A1B0GTR3 108 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 C9orf170A2RU37 121 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 LEUTXA8MZ59 168 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 J3QT63 122 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 M0R1X1 148 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 KPNA3O00505 521 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PSPHP1O15172 72 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 UBDO15205 165 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 BANF1O75531 89 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 VAMP5O95183 116 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 MT-ND4P03905 459 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PET100P0DJ07 73 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 SLC2A1P11166 492 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 CD99P14209 185 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 COX6B1P14854 86 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 SPI1P17947 270 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PAX6P26367 422 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 CCR7P32248 378 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 MPIP34949 423 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 DRD3P35462 400 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 TGFBR2P37173 567 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 CAPZBP47756 277 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 TGM4P49221 684 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 XKP51811 444 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF133P52736 654 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-217ENST00000541578 EMP2P54851 167 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PSME3P61289 254 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 ESRRGP62508 458 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 MED21Q13503 144 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 GUSBP1Q15486 140 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 TRAM1Q15629 374 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF658BQ4V348 819 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-217ENST00000541578 C6orf99Q4VX62 202 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 HSD17B12Q53GQ0 312 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 C5orf47Q569G3 176 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 DNLZQ5SXM8 178 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 EPGNQ6UW88 154 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 CLEC20AQ6ZU45 233 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 DHFR2Q86XF0 187 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PGAM4Q8N0Y7 254 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 OR4M2Q8NGB6 313 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 OR5D18Q8NGL1 313 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 SYNPRQ8TBG9 265 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 C15orf40Q8WUR7 153 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PPWD1Q96BP3 646 aaKnown RBP2.82□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF799Q96GE5 643 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 METTL26Q96S19 204 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PRRT1Q99946 306 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 C20orf144Q9BQM9 153 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 DCUN1D5Q9BTE7 237 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PDCD10Q9BUL8 212 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 SRRQ9GZT4 340 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 Q9H521 79 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 SIRT7Q9NRC8 400 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 MAT2BQ9NZL9 334 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 ZNRD1Q9P1U0 126 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 ANXA10Q9UJ72 324 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 GUCA1BQ9UMX6 200 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 CELA1Q9UNI1 258 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 SIGLEC7Q9Y286 467 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 POLR3HQ9Y535 204 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-217ENST00000541578 ALG5Q9Y673 324 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 TMEM14AQ9Y6G1 99 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 U3KQA8 63 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 PKDREJQ9NTG1 2253 aa2.82□□□□□ -1.96
SNHG1-217ENST00000541578 DOCK4Q8N1I0 1966 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 ANKRD12Q6UB98 2062 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 SPG11Q96JI7 2443 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 KRBOX1C9JBD0 128 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 F5H5T6 163 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 KCNK1O00180 336 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 NDUFS5O43920 106 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 SCN2BO60939 215 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 TRBV12-3P01733 135 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 APCSP02743 223 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 SLC35E2BP0CK96 405 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 TRAPPC2P0DI81 140 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 TRAPPC2BP0DI82 140 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms