RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ZNF660Q6AZW8 331 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-205ENST00000541169 C12orf54Q6X4T0 127 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 ZNF66Q6ZN08 573 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 CCDC190Q86UF4 302 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 OR6Q1Q8NGQ2 317 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 MOB3AQ96BX8 217 aa14.99□□□□□ -0.01
VPS33A-205ENST00000541169 LIN7CQ9NUP9 197 aaKnown RBP14.99□□□□□ -0.01
VPS33A-205ENST00000541169 FBN1P35555 2871 aaKnown RBP14.98□□□□□ -0.01
VPS33A-205ENST00000541169 NCBP2LA6PVI3 153 aaKnown RBP14.98□□□□□ -0.01
VPS33A-205ENST00000541169 PROP1O75360 226 aa14.98□□□□□ -0.01
VPS33A-205ENST00000541169 CD74P04233 296 aa14.98□□□□□ -0.01
VPS33A-205ENST00000541169 AP3S2P59780 193 aa14.98□□□□□ -0.01
VPS33A-205ENST00000541169 AWAT1Q58HT5 328 aa14.98□□□□□ -0.01
VPS33A-205ENST00000541169 LINC01006Q8NI28 216 aa14.98□□□□□ -0.01
VPS33A-205ENST00000541169 ZNF2Q9BSG1 426 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-205ENST00000541169 FCER2P06734 321 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 DUTP33316 252 aaKnown RBP14.97□□□□□ -0.01
VPS33A-205ENST00000541169 LGALS7P47929 136 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 DGCR2P98153 550 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 HNF4GQ14541 408 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 ARSJQ5FYB0 599 aaPredicted RBP14.97□□□□□ -0.01
VPS33A-205ENST00000541169 CMTM1Q8IZ96 169 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 C5orf56Q8N8D9 126 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 NPBQ8NG41 125 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 SECTM1Q8WVN6 248 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 FLYWCH2Q96CP2 140 aaKnown RBP14.97□□□□□ -0.01
VPS33A-205ENST00000541169 TSNAXQ99598 290 aaKnown RBP14.97□□□□□ -0.01
VPS33A-205ENST00000541169 RASL11BQ9BPW5 248 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 SLC5A7Q9GZV3 580 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 KIAA1456Q9P272 454 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 COL6A5A8TX70 2615 aa14.97□□□□□ -0.01
VPS33A-205ENST00000541169 IGKV1D-13A0A0B4J2D9 117 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 NBR2O15453 112 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 SPDEFO95238 335 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 IGKV1-13P0DP09 117 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 ECI1P42126 302 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 KIR2DS2P43631 304 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 UCP3P55916 312 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 ZNF45Q02386 682 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 CATR1Q13166 79 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 MMDQ15546 238 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 PYDC2Q56P42 97 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 STEAP1BQ6NZ63 245 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 C3orf56Q8N813 242 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 ZNF383Q8NA42 475 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 DRAXINQ8NBI3 349 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-205ENST00000541169 AIFM2Q9BRQ8 373 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 THAP7Q9BT49 309 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-205ENST00000541169 SLC35D1Q9NTN3 355 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 RNF114Q9Y508 228 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 V9GYH0 126 aa14.96□□□□□ -0.01
VPS33A-205ENST00000541169 KCNAB3O43448 404 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 RAB3DO95716 219 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 CD3DP04234 171 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 AKAIN1P0CW23 69 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 FAUP35544 74 aaKnown RBP14.95□□□□□ -0.02
VPS33A-205ENST00000541169 FXYD4P59646 89 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 Q8N402 240 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 GDPD1Q8N9F7 314 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 BVESQ8NE79 360 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 OSR1Q8TAX0 266 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-205ENST00000541169 CD300LFQ8TDQ1 290 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 DDB2Q92466 427 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 ZNF702PQ9H963 129 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 PLSCR3Q9NRY6 295 aa14.95□□□□□ -0.02
VPS33A-205ENST00000541169 PEX14O75381 377 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 NDUFA3O95167 84 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 IGLV2-14P01704 120 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 AMY1AP04745 511 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 AMY2AP04746 511 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 MDKP21741 143 aaPredicted RBP14.94□□□□□ -0.02
VPS33A-205ENST00000541169 BLCAPP62952 87 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 ABCA11PQ4W5N1 156 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 RNASE12Q5GAN4 147 aaKnown RBP14.94□□□□□ -0.02
VPS33A-205ENST00000541169 KCTD9Q7L273 389 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 SLC38A6Q8IZM9 456 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 FAM71E2Q8N5Q1 922 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 TCTEX1D1Q8N7M0 179 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 Q8N9W7 124 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 ZNF486Q96H40 463 aaPredicted RBP14.94□□□□□ -0.02
VPS33A-205ENST00000541169 GON7Q9BXV9 100 aa14.94□□□□□ -0.02
VPS33A-205ENST00000541169 ANKRD20A5PA0PJZ0 165 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 DISC1C4P0D8 188 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 J3QRK9 145 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 RBFOX2O43251 390 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS33A-205ENST00000541169 PROK1P58294 105 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 RPS16P62249 146 aaKnown RBP14.93□□□□□ -0.02
VPS33A-205ENST00000541169 TMEM177Q53S58 311 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 GLDNQ6ZMI3 551 aaPredicted RBP14.93□□□□□ -0.02
VPS33A-205ENST00000541169 FOXRED2Q8IWF2 684 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 POC5Q8NA72 575 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 OR4S2Q8NH73 311 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 TERB2Q8NHR7 220 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 PRRT1Q99946 306 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 ZNF747Q9BV97 191 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 CCL28Q9NRJ3 127 aa14.93□□□□□ -0.02
VPS33A-205ENST00000541169 GPR31O00270 319 aa14.92□□□□□ -0.02
VPS33A-205ENST00000541169 GNRHRP30968 328 aa14.92□□□□□ -0.02
VPS33A-205ENST00000541169 VDAC2P45880 294 aaPredicted RBP14.92□□□□□ -0.02
VPS33A-205ENST00000541169 F2RL1P55085 397 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms