RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 TMEM249Q2WGJ8 235 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 TMEM17Q86X19 198 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 MYOZ3Q8TDC0 251 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 RITA1Q96K30 269 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 OR10C1Q96KK4 312 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.28□□□□□ -1.42e-8■■■■■ 46.8
SORL1-207ENST00000528339 ARHGAP32A7KAX9 2087 aa6.28□□□□□ -1.4
SORL1-207ENST00000528339 IGHV1-3A0A0C4DH29 117 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 PPIHO43447 177 aaKnown RBP6.27□□□□□ -1.41
SORL1-207ENST00000528339 IFNA2P01563 188 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 VDAC2P45880 294 aaPredicted RBP6.27□□□□□ -1.41
SORL1-207ENST00000528339 GNB2P62879 340 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 WFDC11Q8NEX6 87 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 OR11H4Q8NGC9 324 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 C17orf50Q8WW18 174 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 ADTRPQ96IZ2 230 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 RCL1Q9Y2P8 373 aaKnown RBP6.27□□□□□ -1.41
SORL1-207ENST00000528339 ZNF257Q9Y2Q1 563 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 IGHV1-69DA0A0B4J2H0 117 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 FAM240BA0A1B0GVZ2 78 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 FAM90A26D6RGX4 464 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 CLDN34H7C241 214 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 PHF1O43189 567 aaPredicted RBP6.27□□□□□ -1.41
SORL1-207ENST00000528339 IGHV1-69P01742 117 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 OR5AC1P0C628 307 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 RPL39P5Q59GN2 51 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 ZNF57Q68EA5 555 aaPredicted RBP6.27□□□□□ -1.41
SORL1-207ENST00000528339 CLEC2AQ6UVW9 174 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 ETV3LQ6ZN32 361 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 OR8H3Q8N146 312 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 MALSU1Q96EH3 234 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 ZNF48Q96MX3 618 aaPredicted RBP6.27□□□□□ -1.41
SORL1-207ENST00000528339 ZNF436Q9C0F3 470 aaPredicted RBP6.27□□□□□ -1.41
SORL1-207ENST00000528339 A6NDX4 124 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 HMSDA8MTL9 139 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 C1QBP02746 253 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 RNASE12Q5GAN4 147 aaKnown RBP6.27□□□□□ -1.41
SORL1-207ENST00000528339 RNF152Q8N8N0 203 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 TMEM167AQ8TBQ9 72 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 SRSF8Q9BRL6 282 aaKnown RBP6.27□□□□□ -1.41
SORL1-207ENST00000528339 OR2D2Q9H210 308 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 KCNIP1Q9NZI2 227 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 MALRD1Q5VYJ5 2156 aa6.27□□□□□ -1.41
SORL1-207ENST00000528339 ST8SIA5O15466 376 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 RRASP10301 218 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 TAS2R30P59541 319 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 ARPC4P59998 168 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 ZNF345Q14585 488 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 FCN2Q15485 313 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 ABHD12Q8N2K0 398 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 UXS1Q8NBZ7 420 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 PHF21AQ96BD5 680 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 TMED3Q9Y3Q3 217 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 DMRT1Q9Y5R6 373 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 ICE1Q9Y2F5 2266 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 PTPN13Q12923 2485 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 TEX15Q9BXT5 2789 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 TEX22C9J3V5 150 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 TMEM50AO95807 157 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 LINC00205P59089 165 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 UBE2KP61086 200 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 SRPXP78539 464 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 BAMBIQ13145 260 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 TRIM16LQ309B1 348 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 ASPHD1Q5U4P2 390 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 PLET1Q6UQ28 207 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 SLC35G3Q8N808 338 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 OSR1Q8TAX0 266 aaPredicted RBP6.26□□□□□ -1.41
SORL1-207ENST00000528339 MRPL20Q9BYC9 149 aaKnown RBP6.26□□□□□ -1.41
SORL1-207ENST00000528339 A0A1B0GU03 582 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 A0A1W2PPH5 198 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 VENTXO95231 258 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 IGKV1-16P04430 117 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 OR3A3P47888 321 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 Q5BKY6 102 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 RBPMSQ93062 196 aaKnown RBP6.26□□□□□ -1.41
SORL1-207ENST00000528339 PERPQ96FX8 193 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 OR2S2Q9NQN1 319 aa6.26□□□□□ -1.41
SORL1-207ENST00000528339 LIN7CQ9NUP9 197 aaKnown RBP6.26□□□□□ -1.41
SORL1-207ENST00000528339 HPRT1P00492 218 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 Q6YL49 198 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 C9orf62Q8N4C0 152 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 ENKURQ8TC29 256 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 CD300LFQ8TDQ1 290 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 CENPVQ7Z7K6 275 aaPredicted RBP6.25□□□□□ -1.41
SORL1-207ENST00000528339 SLC5A7Q9GZV3 580 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 NDUFA4L2Q9NRX3 87 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 HSD17B6O14756 317 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 CREBL2O60519 120 aaPredicted RBP6.25□□□□□ -1.41
SORL1-207ENST00000528339 DEDDO75618 318 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 EDDM3AQ14507 147 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 TMEM86BQ8N661 226 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 CCDC71LQ8N9Z2 235 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 OR13D1Q8NGV5 346 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 AQP10Q96PS8 301 aa6.25□□□□□ -1.41
SORL1-207ENST00000528339 LRRK2Q5S007 2527 aa6.24□□□□□ -1.41
SORL1-207ENST00000528339 TRAV6A0A075B6T7 132 aa6.24□□□□□ -1.41
SORL1-207ENST00000528339 C15orf61A6NNL5 157 aa6.24□□□□□ -1.41
SORL1-207ENST00000528339 NPFFO15130 113 aa6.24□□□□□ -1.41
SORL1-207ENST00000528339 CRYGCP07315 174 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms