RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 LTC4SQ16873 150 aa14.62□□□□□ -0.07
USH1C-205ENST00000527020 FAM90A2PQ658T7 463 aa14.62□□□□□ -0.07
USH1C-205ENST00000527020 TRAT1Q6PIZ9 186 aa14.62□□□□□ -0.07
USH1C-205ENST00000527020 CENPVQ7Z7K6 275 aaPredicted RBP14.62□□□□□ -0.07
USH1C-205ENST00000527020 HSD17B10Q99714 261 aaKnown RBP14.62□□□□□ -0.07
USH1C-205ENST00000527020 CISD1Q9NZ45 108 aaKnown RBP14.62□□□□□ -0.07
USH1C-205ENST00000527020 C5orf52A6NGY3 159 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 BCL2P10415 239 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 ELLP55199 621 aaPredicted RBP14.61□□□□□ -0.07
USH1C-205ENST00000527020 TIMM23BQ5SRD1 257 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 NCR3LG1Q68D85 454 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 Q6ZS92 163 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 FAM90A1Q86YD7 464 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 ZFP92A6NM28 416 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 K7EM74 188 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 EIF3GO75821 320 aaKnown RBP eCLIP14.61□□□□□ -0.07
USH1C-205ENST00000527020 TAGLN2P37802 199 aaKnown RBP14.61□□□□□ -0.07
USH1C-205ENST00000527020 NKX6-1P78426 367 aaPredicted RBP14.61□□□□□ -0.07
USH1C-205ENST00000527020 CR1LQ2VPA4 569 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 HEPN1Q6WQI6 88 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 H2BFWTQ7Z2G1 175 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 DTD1Q8TEA8 209 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 OR2V2Q96R30 315 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 MRPL37Q9BZE1 423 aaKnown RBP14.61□□□□□ -0.07
USH1C-205ENST00000527020 TIMM9Q9Y5J7 89 aa14.61□□□□□ -0.07
USH1C-205ENST00000527020 A0A087WWC5 75 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 TM4SF5O14894 197 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 EIF2S3P41091 472 aaKnown RBP14.6□□□□□ -0.07
USH1C-205ENST00000527020 ACSM6Q6P461 480 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 RPP25LQ8N5L8 163 aaKnown RBP14.6□□□□□ -0.07
USH1C-205ENST00000527020 CA5BP1Q8WTZ4 195 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 TVP23CQ96ET8 276 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 PLPPR2Q96GM1 343 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 MEGF10Q96KG7 1140 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 SNX22Q96L94 193 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 SEBOXQ9HB31 216 aaPredicted RBP14.6□□□□□ -0.07
USH1C-205ENST00000527020 MARCH11A6NNE9 402 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 DUTP33316 252 aaKnown RBP14.6□□□□□ -0.07
USH1C-205ENST00000527020 EIF2S3LQ2VIR3 472 aaKnown RBP14.6□□□□□ -0.07
USH1C-205ENST00000527020 MORN2Q502X0 79 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 SPINK9Q5DT21 86 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 ADAM5Q6NVV9 412 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 SLC35E3Q7Z769 313 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 MOGAT3Q86VF5 341 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 ZNRF1Q8ND25 227 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 PINX1Q96BK5 328 aaKnown RBP14.6□□□□□ -0.07
USH1C-205ENST00000527020 NIPSNAP3BQ9BS92 247 aa14.6□□□□□ -0.07
USH1C-205ENST00000527020 TET2Q6N021 2002 aaPredicted RBP14.59□□□□□ -0.07
USH1C-205ENST00000527020 TANC2Q9HCD6 1990 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 MAP1LC3B2A6NCE7 125 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 MGST3O14880 152 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 LHBP01229 141 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 GLRXP35754 106 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 LOXL3P58215 753 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 RPS16P62249 146 aaKnown RBP14.59□□□□□ -0.07
USH1C-205ENST00000527020 HNF4GQ14541 408 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 TMEM147Q9BVK8 224 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 MAP1LC3BQ9GZQ8 125 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 LAMP3Q9UQV4 416 aa14.59□□□□□ -0.07
USH1C-205ENST00000527020 RAI1Q7Z5J4 1906 aaPredicted RBP14.59□□□□□ -0.07
USH1C-205ENST00000527020 OR9G9P0C7N8 305 aa14.58□□□□□ -0.07
USH1C-205ENST00000527020 GZMHP20718 246 aa14.58□□□□□ -0.07
USH1C-205ENST00000527020 KLF3P57682 345 aaPredicted RBP14.58□□□□□ -0.07
USH1C-205ENST00000527020 RAB11AP62491 216 aa14.58□□□□□ -0.07
USH1C-205ENST00000527020 ATP6V1FQ16864 119 aa14.58□□□□□ -0.07
USH1C-205ENST00000527020 C1orf185Q5T7R7 199 aa14.58□□□□□ -0.07
USH1C-205ENST00000527020 RBMXL3Q8N7X1 1067 aaKnown RBP14.58□□□□□ -0.07
USH1C-205ENST00000527020 EDARADDQ8WWZ3 215 aa14.58□□□□□ -0.07
USH1C-205ENST00000527020 C12orf57Q99622 126 aa14.58□□□□□ -0.07
USH1C-205ENST00000527020 JPT1Q9UK76 154 aa14.58□□□□□ -0.07
USH1C-205ENST00000527020 UBE2CO00762 179 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 GPR12P47775 334 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 ZNF134P52741 427 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 OR2B8PP59922 312 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 RTP5Q14D33 572 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 C3orf36Q3SXR2 165 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 UTF1Q5T230 341 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 ZNF343Q6P1L6 599 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 VHLLQ6RSH7 139 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 Q8TCH9 128 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 ITLN1Q8WWA0 313 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 R3HDM4Q96D70 268 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 QTRT1Q9BXR0 403 aaKnown RBP14.58□□□□□ -0.08
USH1C-205ENST00000527020 GNG12Q9UBI6 72 aa14.58□□□□□ -0.08
USH1C-205ENST00000527020 IGLV3-9A0A075B6K5 115 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 F2RL2O00254 374 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 SPRY3O43610 288 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 YPEL1O60688 119 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 CRYAAP02489 173 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 TFF3Q07654 80 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 VWC2Q2TAL6 325 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 C22orf34Q6ZV56 151 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 YPEL2Q96QA6 119 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 ICE1Q9Y2F5 2266 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 IGHV2-5P01817 119 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 CGB3P0DN86 165 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 CGB7P0DN87 165 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 SELLP14151 372 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 MDKP21741 143 aaPredicted RBP14.57□□□□□ -0.08
USH1C-205ENST00000527020 TIMP3P35625 211 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms