RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FAM206AQ9NX38 181 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 TAS2R5Q9NYW4 299 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 THYN1Q9P016 225 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 CCDC167Q9P0B6 97 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 PLEKHB1Q9UF11 243 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 SHANK1Q9Y566 2161 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 A0A1W2PPI3 338 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 CD300LBA8K4G0 201 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 F5H5P2 479 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 TAAR5O14804 337 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 XRCC3O43542 346 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 KLF7O75840 302 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-216ENST00000523088 TRGC2P03986 189 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 BCKDHAP12694 445 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 CD99P14209 185 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 PRTN3P24158 256 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 PEBP1P30086 187 aaKnown RBP6.38□□□□□ -1.39
HDAC3-216ENST00000523088 G6PCP35575 357 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 RPL3P39023 403 aaKnown RBP6.38□□□□□ -1.39
HDAC3-216ENST00000523088 ECI1P42126 302 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 GDF5P43026 501 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 OR1E2P47887 323 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 LGALS4P56470 323 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 HSPB3Q12988 150 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 ENDOGQ14249 297 aaKnown RBP6.38□□□□□ -1.39
HDAC3-216ENST00000523088 TAL2Q16559 108 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 DEFB110Q30KQ9 67 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF626Q68DY1 528 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 AMMECR1LQ6DCA0 310 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 SLC18B1Q6NT16 456 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 SBSNQ6UWP8 590 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 C12orf54Q6X4T0 127 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 Q6ZTK2 550 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 C8orf86Q6ZUL3 223 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 COMMD6Q7Z4G1 85 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF429Q86V71 674 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 MUC20Q8N307 709 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-216ENST00000523088 LINC01555Q8NAE3 123 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 FDCSPQ8NFU4 85 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 MFSD8Q8NHS3 518 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 PPCDCQ96CD2 204 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 AJUBAQ96IF1 538 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 HSH2DQ96JZ2 352 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 NPFFR1Q9GZQ6 430 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 SH3BGRL3Q9H299 93 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 AKTIPQ9H8T0 292 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 RPRMQ9NS64 109 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 AIG1Q9NVV5 245 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 IDI2-AS1Q9NZ38 188 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 EHFQ9NZC4 300 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 TP53TG1Q9Y2A0 90 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 YARS2Q9Y2Z4 477 aaKnown RBP6.38□□□□□ -1.39
HDAC3-216ENST00000523088 HIVEP3Q5T1R4 2406 aa6.38□□□□□ -1.39
HDAC3-216ENST00000523088 SPENQ96T58 3664 aaKnown RBP6.38□□□□□ -1.39
HDAC3-216ENST00000523088 SPTAN1Q13813 2472 aaKnown RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 LOC102724200A0A096LPH7 203 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 DUXBA0A1W2PPF3 345 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF593O00488 134 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 AGPAT2O15120 278 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 TMPRSS2O15393 492 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 REM1O75628 298 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 DUS4LO95620 317 aaKnown RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 CD8AP01732 235 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 FOXA1P55317 472 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 XGP55808 180 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 RPS15AP62244 130 aaKnown RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 PSG9Q00887 426 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 PRDX1Q06830 199 aaKnown RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 FOXL1Q12952 345 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 NKG7Q16617 165 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 MST1LQ2TV78 715 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 FHL5Q5TD97 284 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 C1orf189Q5VU69 101 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 Q6Q795 121 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 DUX4L9Q6RFH8 374 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 Q6ZT83 130 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 GLCCI1Q86VQ1 547 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 TMEM219Q86XT9 240 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 CDC20BQ86Y33 519 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 CMTM4Q8IZR5 234 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 TMEM151AQ8N4L1 468 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF611Q8N823 705 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 OR2A1Q8NGT9 310 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 THEM6Q8WUY1 208 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 LRRC58Q96CX6 371 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 MSI2Q96DH6 328 aaKnown RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 PELI1Q96FA3 418 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 OR2D2Q9H210 308 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 B3GAT2Q9NPZ5 323 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 MEPEQ9NQ76 525 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-216ENST00000523088 PRTFDC1Q9NRG1 225 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 C20orf141Q9NUB4 165 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 TMEM106BQ9NUM4 274 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF226Q9NYT6 803 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 DUSP13Q9UII6 198 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 NTNG1Q9Y2I2 539 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 NAV2Q8IVL1 2488 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 SCN2AQ99250 2005 aa6.37□□□□□ -1.39
HDAC3-216ENST00000523088 CPAMD8Q8IZJ3 1885 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms