RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SOCS1O15524 211 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 CHST10O43529 356 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 OR7C2O60412 319 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 PIAS1O75925 651 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 SLC25A14O95258 325 aaPredicted RBP2.84□□□□□ -1.95
SKP1-209ENST00000522552 INSP01308 110 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 CSN2P05814 226 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 OR10J1P30954 320 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 PSMD8P48556 350 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 UBE2AP49459 152 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 DAPP51397 102 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 TBPL1P62380 186 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 RHEBQ15382 184 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 LAIR2Q6ISS4 152 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 LRP11Q86VZ4 500 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 ANGPTL5Q86XS5 388 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 MKXQ8IYA7 352 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 KRTCAP2Q8N6L1 136 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 C14orf178Q8N769 122 aaPredicted RBP2.84□□□□□ -1.95
SKP1-209ENST00000522552 ZNF615Q8N8J6 731 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 ZDHHC22Q8N966 263 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 OR4D11Q8NGI4 311 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 ZNF675Q8TD23 568 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 VOPP1Q96AW1 172 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 STARD4Q96DR4 205 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 L3HYPDHQ96EM0 354 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 ZNF414Q96IQ9 312 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 GPR82Q96P67 336 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 SOSTQ9BQB4 213 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 HSPB9Q9BQS6 159 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 HDHD3Q9BSH5 251 aaPredicted RBP2.84□□□□□ -1.95
SKP1-209ENST00000522552 CHST6Q9GZX3 395 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 MMP26Q9NRE1 261 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 CACNA1SQ13698 1873 aa2.84□□□□□ -1.96
SKP1-209ENST00000522552 PTPRJQ12913 1337 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 BICRAQ9NZM4 1560 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 ANKRD12Q6UB98 2062 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 THSD7AQ9UPZ6 1657 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 ADAMTS13Q76LX8 1427 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 IGLV1-50A0A075B6I6 118 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 IGHV1-69-2A0A0G2JMI3 117 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 ZFP92A6NM28 416 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 H3BSA7 217 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 PIRO00625 290 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 SMIM24O75264 130 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 POP7O75817 140 aaKnown RBP2.83□□□□□ -1.96
SKP1-209ENST00000522552 IGLV3-27P01718 113 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 COX4I1P13073 169 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 LHX2P50458 406 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 EMP1P54849 157 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 LYZP61626 148 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 DEFA6Q01524 100 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 LTC4SQ16873 150 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 PLPPR5Q32ZL2 321 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 ZFAND6Q6FIF0 208 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 C12orf45Q8N5I9 185 aaPredicted RBP2.83□□□□□ -1.96
SKP1-209ENST00000522552 GPR119Q8TDV5 335 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 MBD3L1Q8WWY6 194 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 TMEM158Q8WZ71 300 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 PLEKHB2Q96CS7 222 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 GNPNAT1Q96EK6 184 aaPredicted RBP2.83□□□□□ -1.96
SKP1-209ENST00000522552 ZNF285Q96NJ3 590 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 NMNAT3Q96T66 252 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 CCL13Q99616 98 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 TMEM70Q9BUB7 260 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 DNAJC12Q9UKB3 198 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 CYSLTR1Q9Y271 337 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 WDR7Q9Y4E6 1490 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 ARAP3Q8WWN8 1544 aa2.83□□□□□ -1.96
SKP1-209ENST00000522552 HECW1Q76N89 1606 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 IGHV5-51A0A0C4DH38 117 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 IGHV5-10-1A0A0J9YXX1 117 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 CLDN25C9JDP6 229 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 F8W036 122 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 H7C423 109 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 AIPO00170 330 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 SULT1C4O75897 302 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 LY6G6DO95868 133 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 APOA2P02652 100 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 OGNP20774 298 aaKnown RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 CNTFRP26992 372 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 CA7P43166 264 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 CMC4P56277 68 aaPredicted RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 CAV1Q03135 178 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 ATP5G2Q06055 141 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 PDGFRLQ15198 375 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 CST6Q15828 149 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 BAP18Q8IXM2 172 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 ORMDL3Q8N138 153 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 OR9Q1Q8NGQ5 310 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 LINC01006Q8NI28 216 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 THEM6Q8WUY1 208 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 DNAJC9Q8WXX5 260 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 FRZBQ92765 325 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 MS4A6EQ96DS6 147 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 C16orf74Q96GX8 76 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 IGF2BP2-AS1Q96M15 143 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 LINC00479Q96M42 142 aa2.82□□□□□ -1.96
SKP1-209ENST00000522552 ERMAPQ96PL5 475 aaPredicted RBP2.82□□□□□ -1.96
SKP1-209ENST00000522552 ZNF382Q96SR6 550 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms