RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RAP1GDS1P52306 607 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ZNF138P52744 262 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 REG3AQ06141 175 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 FOXF1Q12946 379 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 MPPED2Q15777 294 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ARHGAP11BQ3KRB8 267 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ORMDL2Q53FV1 153 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 TSPO2Q5TGU0 170 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 METTL21CQ5VZV1 264 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 STEAP4Q687X5 459 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 DEGS2Q6QHC5 323 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 SSX6Q7RTT6 188 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ZNF429Q86V71 674 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRRC28Q86X40 367 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 COX18Q8N8Q8 333 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR10W1Q8NGF6 305 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 SYNPRQ8TBG9 265 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ZFAND1Q8TCF1 268 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ZHX1-C8orf76Q96EF9 292 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 TRNT1Q96Q11 434 aaKnown RBP3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR4K3Q96R72 315 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 NABP2Q9BQ15 211 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 TUBA4BQ9H853 241 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR51B2Q9Y5P1 312 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 IGLV1-50A0A075B6I6 118 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 INS-IGF2F8WCM5 200 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 NPFFO15130 113 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 PFDN6O15212 129 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 FADS2O95864 444 aaKnown RBP3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 PGA4P0DJD7 388 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 PGA3P0DJD8 388 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 MPC1LP0DKB6 136 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 CD37P11049 281 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 SPNP16150 400 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 CBR1P16152 277 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 IGFBP3P17936 291 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 RPS3P23396 243 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 ELK4P28324 431 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 PPP1R2P41236 205 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 EIF1P41567 113 aaKnown RBP3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 ARF6P62330 175 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 CRADDP78560 199 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 PRB3Q04118 309 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 PSG7Q13046 419 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 PSG5Q15238 335 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 MOGQ16653 247 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRRC75BQ2VPJ9 315 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 PPP1R2P3Q6NXS1 205 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 VMO1Q7Z5L0 202 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 MDP1Q86V88 176 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 PCP2Q8IVA1 136 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 Q8N2B8 174 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 FAM86B1Q8N7N1 296 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 ANGPTL6Q8NI99 470 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 RORBQ92753 470 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 TM4SF18Q96CE8 201 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 WDR34Q96EX3 536 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 IFI27L2Q9H2X8 130 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 TMEM106BQ9NUM4 274 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 DSPPQ9NZW4 1301 aa3.17□□□□□ -1.9
HMGB1P23-201ENST00000518743 DNAH5Q8TE73 4624 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 A0A0A6YYD5 115 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 A0A0B4J2E0 115 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 A6NDX4 124 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 MANBAO00462 879 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 ZNF593O00488 134 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 TAAR5O14804 337 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 MYL12BO14950 172 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 FADS1O60427 444 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 CA11O75493 328 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 IGHV1-46P01743 117 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR5AL1P0C617 328 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 CD79AP11912 226 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 CPMP14384 443 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 TCP1P17987 556 aaKnown RBP3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 KDELR1P24390 212 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 TALDO1P37837 337 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 RAB13P51153 203 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 XKP51811 444 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 NDUFA8P51970 172 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 HCCSP53701 268 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 TSPAN5P62079 268 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 HSP90B2PQ58FF3 399 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 GCSAMLQ5JQS6 135 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR2T5Q6IEZ7 315 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 FBXW12Q6X9E4 464 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 IQCF2Q8IXL9 164 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 Q8N9W7 124 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR2T29Q8NH02 315 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR1S1Q8NH92 325 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 PIGXQ8TBF5 258 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 C11orf40Q8WZ69 217 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 ZNF681Q96N22 645 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 CAMK2N2Q96S95 79 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 CIB1Q99828 191 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 SULT4A1Q9BR01 284 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 COPS4Q9BT78 406 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 EMC6Q9BV81 110 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 TMED9Q9BVK6 235 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 PARVBQ9HBI1 364 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms