RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 SLC17A3O00476 420 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 LIPFP07098 398 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 PATE4P0C8F1 98 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 COX5BP10606 129 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 CD40P25942 277 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 DNLZQ5SXM8 178 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 GALNT14Q96FL9 552 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 INSIG2Q9Y5U4 225 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 TMEM250H0YL14 139 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 GGTLC2Q14390 218 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 KCNMB1Q16558 191 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 RFESDQ8TAC1 157 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 MRGPRFQ96AM1 343 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 PERPQ96FX8 193 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 OR2W1Q9Y3N9 320 aa10.58□□□□□ -0.72
PCDHGA6-201ENST00000517434 HRKO00198 91 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 DLEU1O43261 78 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 SMIM13P0DJ93 91 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 NUTF2P61970 127 aaKnown RBP10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 JOSD1Q15040 202 aaPredicted RBP10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 OR8G5Q8NG78 346 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 R3HDM4Q96D70 268 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 MARS2Q96GW9 593 aaKnown RBP10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 GRIFINA4D1Z8 144 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 B9A039 149 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 NUDT3O95989 172 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 RBP4P02753 201 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 CCL2P13500 99 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 LPAR2Q9HBW0 351 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 DXOO77932 396 aaKnown RBP10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 AMY1AP04745 511 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 NPY1RP25929 384 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 IGLV3-21P80748 117 aaPredicted RBP10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 MESTQ5EB52 335 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 IBA57Q5T440 356 aaKnown RBP10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 ATOH7Q8N100 152 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZFC3H1O60293 1989 aaKnown RBP10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 ORM2P19652 201 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 UCP2P55851 309 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 NANOS3P60323 173 aaKnown RBP10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 TMEM30BQ3MIR4 351 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 TMEM52Q8NDY8 209 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 FDCSPQ8NFU4 85 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 OR1L1Q8NH94 360 aa10.57□□□□□ -0.72
PCDHGA6-201ENST00000517434 TET1Q8NFU7 2136 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 CDIPTO14735 213 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 MPDU1O75352 247 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 FOXH1O75593 365 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 GCM2O75603 506 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 FSTP19883 344 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 FBLN7Q53RD9 439 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 TEPPQ6URK8 271 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 MRGPRDQ8TDS7 321 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 MBD3L1Q8WWY6 194 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 HIST1H4GQ99525 98 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 A1L4Q6 167 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 MPZL1O95297 269 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 RPL30P62888 115 aaKnown RBP10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 C1QL3Q5VWW1 255 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 UFC1Q9Y3C8 167 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 ANK1P16157 1881 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 MGAMO43451 1857 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 F5H697 171 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 VENTXO95231 258 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 SMIM10L1P0DMW3 83 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 AREGP15514 252 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 SMIM10Q96HG1 83 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 VCX2Q9H322 139 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 DNAJC13O75165 2243 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 SYNGR3O43761 229 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 RPL31P62899 125 aaKnown RBP10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZNF260Q3ZCT1 412 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 LDLRAD2Q5SZI1 272 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 QTRT1Q9BXR0 403 aaKnown RBP10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 ASCL3Q9NQ33 180 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 SLC25A10Q9UBX3 287 aaPredicted RBP10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 DSPPQ9NZW4 1301 aa10.56□□□□□ -0.72
PCDHGA6-201ENST00000517434 SVILO95425 2214 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 TRBV5-5A0A0J9YX44 114 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 MGST3O14880 152 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 LMX1BO60663 402 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 NDUFS6O75380 124 aaKnown RBP10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 WISP3O95389 354 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 CLDN18P56856 261 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 COL10A1Q03692 680 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 TWIST1Q15672 202 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 TMEM45BQ96B21 275 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 C14orf144Q96I85 54 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 PGLYRP3Q96LB9 341 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 BRCA1P38398 1863 aaKnown RBP10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 RPS11P62280 158 aaKnown RBP eCLIP10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 TMEM208Q9BTX3 173 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 SPCS1Q9Y6A9 102 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 PTPRFP10586 1907 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 IGKV1-8A0A0C4DH67 115 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 S1PR2O95136 353 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 LINC00869P0C866 280 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 OTX1P32242 354 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 FAM57AQ8TBR7 257 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms