RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 SLC38A6Q8IZM9 456 aa12.01□□□□□ -0.49
NUP54-213ENST00000513352 OR2T10Q8NGZ9 312 aa12.01□□□□□ -0.49
NUP54-213ENST00000513352 PIFOQ8TCI5 191 aa12.01□□□□□ -0.49
NUP54-213ENST00000513352 MARCH1Q8TCQ1 289 aa12.01□□□□□ -0.49
NUP54-213ENST00000513352 ADTRPQ96IZ2 230 aa12.01□□□□□ -0.49
NUP54-213ENST00000513352 GPHA2Q96T91 129 aa12.01□□□□□ -0.49
NUP54-213ENST00000513352 TSC22D3Q99576 134 aa12.01□□□□□ -0.49
NUP54-213ENST00000513352 SLC35D1Q9NTN3 355 aa12.01□□□□□ -0.49
NUP54-213ENST00000513352 WASHC3Q9Y3C0 194 aa12.01□□□□□ -0.49
NUP54-213ENST00000513352 A6NDX4 124 aa12□□□□□ -0.49
NUP54-213ENST00000513352 H0YJW9 148 aa12□□□□□ -0.49
NUP54-213ENST00000513352 GPR31O00270 319 aa12□□□□□ -0.49
NUP54-213ENST00000513352 GPR137BO60478 399 aa12□□□□□ -0.49
NUP54-213ENST00000513352 MOSP00540 346 aa12□□□□□ -0.49
NUP54-213ENST00000513352 CRYBA1P05813 215 aa12□□□□□ -0.49
NUP54-213ENST00000513352 PI3P19957 117 aa12□□□□□ -0.49
NUP54-213ENST00000513352 GNRHRP30968 328 aa12□□□□□ -0.49
NUP54-213ENST00000513352 DUTP33316 252 aaKnown RBP12□□□□□ -0.49
NUP54-213ENST00000513352 CATR1Q13166 79 aa12□□□□□ -0.49
NUP54-213ENST00000513352 RTL8BQ17RB0 113 aa12□□□□□ -0.49
NUP54-213ENST00000513352 AADACL3Q5VUY0 350 aa12□□□□□ -0.49
NUP54-213ENST00000513352 LHFPL1Q86WI0 220 aa12□□□□□ -0.49
NUP54-213ENST00000513352 CMTM1Q8IZ96 169 aa12□□□□□ -0.49
NUP54-213ENST00000513352 ZNF383Q8NA42 475 aa12□□□□□ -0.49
NUP54-213ENST00000513352 ZBTB34Q8NCN2 500 aa12□□□□□ -0.49
NUP54-213ENST00000513352 OR51H1Q8NH63 302 aa12□□□□□ -0.49
NUP54-213ENST00000513352 ZFAND1Q8TCF1 268 aa12□□□□□ -0.49
NUP54-213ENST00000513352 AKR1E2Q96JD6 320 aa12□□□□□ -0.49
NUP54-213ENST00000513352 HSD17B10Q99714 261 aaKnown RBP12□□□□□ -0.49
NUP54-213ENST00000513352 PRELID3BQ9Y3B1 194 aa12□□□□□ -0.49
NUP54-213ENST00000513352 FAM90A9PA6NNJ1 464 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 LINC00473A8K010 186 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 CLDN34H7C241 214 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 FCGR3BO75015 233 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 PEX14O75381 377 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 IGLV2-14P01704 120 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 RLN1P04808 185 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 MC5RP33032 325 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 ECI1P42126 302 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 UCP3P55916 312 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 HABP2Q14520 560 aaPredicted RBP11.99□□□□□ -0.49
NUP54-213ENST00000513352 MSMO1Q15800 293 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 FBLN7Q53RD9 439 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 DHRS7BQ6IAN0 325 aaPredicted RBP11.99□□□□□ -0.49
NUP54-213ENST00000513352 C16orf87Q6PH81 154 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 CCBE1Q6UXH8 406 aaPredicted RBP11.99□□□□□ -0.49
NUP54-213ENST00000513352 ZNF66Q6ZN08 573 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 PRIMA1Q86XR5 153 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 THNSL2Q86YJ6 484 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 BVESQ8NE79 360 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 OR13C8Q8NGS7 320 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 DEDD2Q8WXF8 326 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 EAF1Q96JC9 268 aaPredicted RBP11.99□□□□□ -0.49
NUP54-213ENST00000513352 SLC25A33Q9BSK2 321 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 RSRP1Q9BUV0 290 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 RAB18Q9NP72 206 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 SLC2A8Q9NY64 477 aa11.99□□□□□ -0.49
NUP54-213ENST00000513352 C14orf166Q9Y224 244 aaKnown RBP11.99□□□□□ -0.49
NUP54-213ENST00000513352 FAM181BA6NEQ2 426 aa11.98□□□□□ -0.49
NUP54-213ENST00000513352 NAP1L6A6NFF2 107 aa11.98□□□□□ -0.49
NUP54-213ENST00000513352 NCBP2LA6PVI3 153 aaKnown RBP11.98□□□□□ -0.49
NUP54-213ENST00000513352 RNF212BA8MTL3 300 aa11.98□□□□□ -0.49
NUP54-213ENST00000513352 UPK1BO75841 260 aa11.98□□□□□ -0.49
NUP54-213ENST00000513352 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
NUP54-213ENST00000513352 RPS16P62249 146 aaKnown RBP11.98□□□□□ -0.49
NUP54-213ENST00000513352 RPL30P62888 115 aaKnown RBP11.98□□□□□ -0.49
NUP54-213ENST00000513352 LIAT1Q6ZQX7 453 aa11.98□□□□□ -0.49
NUP54-213ENST00000513352 PDPNQ86YL7 162 aa11.98□□□□□ -0.49
NUP54-213ENST00000513352 OR5AN1Q8NGI8 311 aa11.98□□□□□ -0.49
NUP54-213ENST00000513352 CHST1O43916 411 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 PGLYRP1O75594 196 aaPredicted RBP11.97□□□□□ -0.49
NUP54-213ENST00000513352 CRYZL1O95825 349 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 RRASP10301 218 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 TAGLNQ01995 201 aaKnown RBP11.97□□□□□ -0.49
NUP54-213ENST00000513352 MMDQ15546 238 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 CCDC71LQ8N9Z2 235 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 POC5Q8NA72 575 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 FLYWCH2Q96CP2 140 aaKnown RBP11.97□□□□□ -0.49
NUP54-213ENST00000513352 RBM14Q96PK6 669 aaKnown RBP11.97□□□□□ -0.49
NUP54-213ENST00000513352 C7orf50Q9BRJ6 194 aaKnown RBP11.97□□□□□ -0.49
NUP54-213ENST00000513352 SLC2A9Q9NRM0 540 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 COPZ2Q9P299 210 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 MOB4Q9Y3A3 225 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
NUP54-213ENST00000513352 LYRM1O43325 122 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 OR2F2O95006 317 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 IGKV1-16P04430 117 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 CTSDP07339 412 aaPredicted RBP11.96□□□□□ -0.49
NUP54-213ENST00000513352 KIR2DS2P43631 304 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 CCR6P51684 374 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 PIGPP57054 158 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 EIF4EBP1Q13541 118 aaPredicted RBP11.96□□□□□ -0.49
NUP54-213ENST00000513352 PLGLAQ15195 96 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 SURF2Q15527 256 aaPredicted RBP11.96□□□□□ -0.49
NUP54-213ENST00000513352 ARSJQ5FYB0 599 aaPredicted RBP11.96□□□□□ -0.49
NUP54-213ENST00000513352 C16orf82Q7Z2V1 217 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 TBC1D26Q86UD7 250 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 SPAG16Q8N0X2 631 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 OR4S2Q8NH73 311 aa11.96□□□□□ -0.49
NUP54-213ENST00000513352 DDB2Q92466 427 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms